It seems that 'broom' itself is failing tests on CRAN under Windows oldrel, and this may cause it to be missing from the R installation running tests on CRAN.
See: https://cran.r-project.org/web/checks/check_results_broom.html Pedro. -- Pedro J. Aphalo University Lecturer, Principal Investigator Organismal and Evolutionary Biology (OEB) Research Programme University of Helsinki Finland > -----Original Message----- > From: R-package-devel <r-package-devel-boun...@r-project.org> On Behalf Of > Hadley Wickham > Sent: 10 September 2019 15:16 > To: Georgina Anderson <georgina.ander...@phe.gov.uk> > Cc: r-package-devel@r-project.org > Subject: Re: [R-pkg-devel] OFFICIAL: R-devel check error: package or > NAMESPACE load failed, there is no package called broom > > This works for me locally too, so I'd recommend trying win-devel again. > Sometimes you catch it in an inconsistent state and your check fails for > reasons > unrelated to your package. > > Hadley > > On Sat, Sep 7, 2019 at 3:50 PM Georgina Anderson > <georgina.ander...@phe.gov.uk> wrote: > > > > OFFICIAL > > > > Hi > > > > Any help with the following update to my package PHEindicatormethods > would be appreciated. > > > > I have made a very minor change to the package to fix dependencies on the > tidyr:nest() function as tidyr v 1.0.0 is due to be released with breaking > changes > on 9th September. > > The version I am trying to upload to CRAN is 1.1.5 available here: > > https://github.com/PublicHealthEngland/PHEindicatormethods > > > > > > When I run devtools::check_win_devel locally (Windows 10 laptop, R > > 3.6.1, rStudio 1.2.1335) it passes with no NOTES, ERRORS or WARNINGS > > (locally it also passes devtools::check_win on release and oldrelease > > and devtools::check_rhub) > > > > When I submit to CRAN I have been notified that package > PHEindicatormethods_1.1.5.tar.gz does not pass the incoming checks > automatically, signposting failing pre-tests on Windows: > > > > * using R Under development (unstable) (2019-09-02 r77130) > > > > * using platform: x86_64-w64-mingw32 (64-bit) > > > > * using session charset: ISO8859-1 > > > > > > > > This is the log file available for 7 days: > > https://win-builder.r-project.org/incoming_pretest/PHEindicatormethods > > _1.1.5_20190905_224346/Windows/00check.log > > > > Below are two sections from the log that show the errors: > > > > > > > library('PHEindicatormethods') > > > > Error: package or namespace load failed for 'PHEindicatormethods' in > loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]): > > > > there is no package called 'broom' > > > > Execution halted > > > > ** running examples for arch 'x64' ... ERROR > > > > Running examples in 'PHEindicatormethods-Ex.R' failed > > > > The error occurred in: > > > > R Under development (unstable) (2019-09-02 r77130) -- "Unsuffered > Consequences" > > > > Copyright (C) 2019 The R Foundation for Statistical Computing > > > > Platform: x86_64-w64-mingw32/x64 (64-bit) > > > > > > Error: processing vignette 'WorkedExamples_phe_sii.Rmd' failed with > diagnostics: > > > > package or namespace load failed for 'PHEindicatormethods' in > loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]): > > > > there is no package called 'broom' > > > > --- failed re-building 'WorkedExamples_phe_sii.Rmd' > > > > SUMMARY: processing the following file failed: > > > > 'WorkedExamples_phe_sii.Rmd' > > > > Error: Vignette re-building failed. > > > > Execution halted > > > > I have checked the broom package and its upstream dependency on generics - > I notice the tidy() function was moved from broom to generics a while back but > this was before I submitted the current version (1.1.3) of my package to CRAN > so not sure this can be the problem, although one of my functions does > reference broom::tidy(). The evidence seems to point to changes in R-devel > causing something in my package to break but without being able to reproduce > the errors seen by CRAN I'm finding it difficult to pinpoint the problem. > > > > Thanks > > Georgie > > > > > > > ***************************************************************** > ***** > > **** The information contained in the EMail and any attachments is > > confidential and intended solely and for the attention and use of the > > named addressee(s). It may not be disclosed to any other person > > without the express authority of Public Health England, or the > > intended recipient, or both. If you are not the intended recipient, > > you must not disclose, copy, distribute or retain this message or any > > part of it. This footnote also confirms that this EMail has been swept > > for computer viruses by Symantec.Cloud, but please re-sweep any > > attachments before opening or saving. http://www.gov.uk/PHE > > > ***************************************************************** > ********* > > [[alternative HTML version deleted]] > > > > ______________________________________________ > > R-package-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/r-package-devel > > > > -- > http://hadley.nz > > ______________________________________________ > R-package-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-package-devel ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
