Duncan Murdoch <murdoch.duncan <at> gmail.com> writes:
> I doubt if that was the error message. More likely you saw > > Error: evaluation nested too deeply: infinite recursion / > options(expressions=)? Exactly this was the error message I recieved >This isn't a case of the source being nested to deeply, but rather of the >evaluation being nested too deeply. > This happens in recursive algorithms when R runs out of > stack space, around 5000 calls deep. Is it likely in your dataset that > a recursion depth of 5000 is reasonable? In most cases this indicates a > programming error that leads to an infinite recursion, but there are > probably cases where a depth like that is reasonable. I don't think that it is a programming error, because I succeyyfully calculated subgraph isomirphism with the algorithm, but with smaller input graphs. So the algorithm seems to work. I already tried to set options(expressions=500000), but then I cause a protection stack overflow: error: protect(): protection stack overflow Is the problem that too many objects are stored in the stack? If yes, somebody knows how to solve this problem? thanks for your replies ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
