Hi Christoph,
Christoph Knapp wrote:
Hi all,
I'm just tried to start analysing some micro-array chips. And R was
asking for this package. When I tried to install it it says that:
Using R version 2.10.1, biocinstall version 2.5.10.
Installing Bioconductor version 2.5 packages:
[1] "hugene10stv1cdf"
Please wait...
Warning message:
In getDependencies(pkgs, dependencies, available, lib) :
package ‘hugene10stv1cdf’ is not available
What do I wrong and where can I get this package from?
This is a Bioconductor package, so the correct list to ask this is the
Bioconductor-help list, not R-help.
But what you want is
dat <- ReadAffy(cdfname="hugene10stv1.r3cdf")
and go from there. Affy has the unfortunate habit of naming related data
with inconsistent names, and when I built this package last time I
didn't notice the inconsistency.
Best,
Jim
Thanks
Christoph
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