It's possible I have failed to understand your situation (it's not clearly described).
If your model captures the dependence structure (e.g. that induced by a common-but-unknown block effect), then in many cases it could be set up to work. If the dependence is of some form not captured in the model, then it might not. -- View this message in context: http://n4.nabble.com/bootstrap-confidence-intervals-non-iid-tp1751619p1770084.html Sent from the R help mailing list archive at Nabble.com. ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.