Those are the same warnings I get when I test the package (before submitting to CRAN) and have been that way for a long time. They stemmed from conditional allocation of arrays in C. gcc -wall seems to always pick on that. As far as I know, they are harmless.
Andy > -----Original Message----- > From: r-help-boun...@r-project.org > [mailto:r-help-boun...@r-project.org] On Behalf Of NCS > Sent: Friday, December 04, 2009 5:45 PM > To: r-help@r-project.org > Subject: [R] Installing RandomForest on SuSe Linux - warnings > > > > I installed RF on Linux OpenSuSe 11.1 and while it did > install and did run a model I had created on Windows > correctly, it gave me a lot of "uninitialized" warnings. I > don't know if these are significant and so am a little > concerned even though my model ran. Any thoughts? > > Thanks > > R version 2.10.0 (2009-10-26) > Copyright (C) 2009 The R Foundation for Statistical Computing > ISBN 3-900051-07-0 > > R is free software and comes with ABSOLUTELY NO WARRANTY. > You are welcome to redistribute it under certain conditions. > Type 'license()' or 'licence()' for distribution details. > > Natural language support but running in an English locale > > R is a collaborative project with many contributors. > Type 'contributors()' for more information and > 'citation()' on how to cite R or R packages in publications. > > Type 'demo()' for some demos, 'help()' for on-line help, or > 'help.start()' for an HTML browser interface to help. > Type 'q()' to quit R. > > > install.packages("randomForest") > --- Please select a CRAN mirror for use in this session --- > CRAN mirror > > 1: Argentina (Buenos Aires) 2: Australia > 3: Austria 4: Belarus > 5: Belgium 6: Brazil (PR) > 7: Brazil (RJ) 8: Brazil (SP 1) > 9: Brazil (SP 2) 10: Canada (BC) > 11: Canada (ON) 12: Canada (QC) > 13: Chile 14: China (Beijing 1) > 15: China (Beijing 2) 16: China (Hong Kong) > 17: Colombia 18: Denmark > 19: France (Toulouse) 20: France (Lyon) > 21: France (Paris) 22: Germany (Berlin) > 23: Germany (Goettingen) 24: Germany (Hannover) > 25: Germany (Muenchen) 26: Germany (Wiesbaden) > 27: Iran 28: Ireland > 29: Italy (Milano) 30: Italy (Padua) > 31: Italy (Palermo) 32: Japan (Aizu) > 33: Japan (Hyogo) 34: Japan (Tokyo) > 35: Japan (Tsukuba) 36: Korea > 37: Netherlands 38: New Zealand > 39: Norway 40: Poland (Oswiecim) > 41: Poland (Wroclaw) 42: Portugal > 43: Russia 44: Singapore 1 > 45: Singapore 2 46: Slovakia > 47: South Africa 48: Spain (Madrid) > 49: Sweden 50: Switzerland > 51: Taiwan (Taichung) 52: Taiwan (Taipeh) > 53: Thailand 54: UK (Bristol) > 55: UK (London) 56: USA (AZ) > 57: USA (CA 1) 58: USA (CA 2) > 59: USA (IA) 60: USA (MA) > 61: USA (MD) 62: USA (MI) > 63: USA (MO) 64: USA (NC) > 65: USA (OH) 66: USA (PA 1) > 67: USA (PA 2) 68: USA (TN) > 69: USA (TX 1) 70: USA (TX 3) > 71: USA (WA) > > Selection: 57 > trying URL > 'http://cran.cnr.Berkeley.edu/src/contrib/randomForest_4.5-33.tar.gz' > Content type 'application/x-gzip' length 71745 bytes (70 Kb) > opened URL > ================================================== > downloaded 70 Kb > > * installing *source* package ârandomForestâ ... > ** libs > gcc -std=gnu99 -I/usr/lib64/R/include -I/usr/local/include > -fpic -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 > -fstack-protector -funwind-tables > -fasynchronous-unwind-tables -c classTree.c -o classTree.o > classTree.c: In function âpredictClassTreeâ: > classTree.c:414: warning: âcbestsplitâ may be used > uninitialized in this function > gcc -std=gnu99 -I/usr/lib64/R/include -I/usr/local/include > -fpic -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 > -fstack-protector -funwind-tables > -fasynchronous-unwind-tables -c regTree.c -o regTree.o > regTree.c: In function âpredictRegTreeâ: > regTree.c:294: warning: âcbestsplitâ may be used > uninitialized in this function > gcc -std=gnu99 -I/usr/lib64/R/include -I/usr/local/include > -fpic -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 > -fstack-protector -funwind-tables > -fasynchronous-unwind-tables -c regrf.c -o regrf.o > regrf.c: In function âregRFâ: > regrf.c:61: warning: ânodextsâ may be used uninitialized in > this function > regrf.c:55: warning: âytreeâ may be used uninitialized in > this function > gcc -std=gnu99 -I/usr/lib64/R/include -I/usr/local/include > -fpic -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 > -fstack-protector -funwind-tables > -fasynchronous-unwind-tables -c rf.c -o rf.o > rf.c: In function âclassRFâ: > rf.c:97: warning: âoobpairâ may be used uninitialized in this function > rf.c:98: warning: âstrata_sizeâ may be used uninitialized in > this function > rf.c:98: warning: âstrata_idxâ may be used uninitialized in > this function > rf.c:97: warning: ânindâ may be used uninitialized in this function > rf.c:89: warning: ânstrataâ may be used uninitialized in this function > rf.c:92: warning: âncltsâ may be used uninitialized in this function > gfortran -fpic -fmessage-length=0 -O2 -Wall > -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables > -fasynchronous-unwind-tables -c rfsub.f -o rfsub.o > gcc -std=gnu99 -I/usr/lib64/R/include -I/usr/local/include > -fpic -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 > -fstack-protector -funwind-tables > -fasynchronous-unwind-tables -c rfutils.c -o rfutils.o > gcc -std=gnu99 -shared -L/usr/local/lib64 -o randomForest.so > classTree.o regTree.o regrf.o rf.o rfsub.o rfutils.o > -lgfortran -lm -L/usr/lib64/R/lib -lR > ** R > ** data > ** inst > ** preparing package for lazy loading > ** help > *** installing help indices > ** building package indices ... > * DONE (randomForest) > > The downloaded packages are in > â/tmp/Rtmp23U5PY/downloaded_packagesâ > Updating HTML index of packages in '.Library' > > > > > > > ______________________________________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > Notice: This e-mail message, together with any attachme...{{dropped:10}} ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
