What does the command
c:\progra~1\R\R-2.9.1\bin\Rgui --vanilla
do?
At first I thought that I could run it from R. But then it did not work.
I'm using a mac, and I don't know how access MSDOS in a mac. I actually
installed R on the pc and tried to run the command from MSDOS and it also
didn't work.
could you please tell me what were you trying to do? I'm guessing that you
were trying to get an R console that is absolutely clean, I think that what
you meant by fresh copy of R.
Anyway, I ran the same model on the pc, this is a fresh copy, there is
nothing attached or stored.
mymodel<-(aov(mice~veget*fruit*time+(time*block)+(time*block*veget)+(time*block*fruit)+coon+Error(block/plot),
data = track))
Warning message:
In aov(mice ~ veget * fruit * time + (time * block) + (time * block * :
Error() model is singular
summary(mymodel)
Error: block
Df Sum Sq Mean Sq
block 2 4581.5 2290.7
Error: block:plot
Df Sum Sq Mean Sq F value Pr(>F)
veget 1 1602.91 1602.91 379.1653 0.03267 *
fruit 1 80.07 80.07 18.9411 0.14378
coon 1 193.53 193.53 45.7791 0.09341 .
veget:fruit 1 40.26 40.26 9.5245 0.19948
veget:block 2 355.53 177.76 42.0495 0.10840
fruit:block 2 15.39 7.69 1.8200 0.46423
Residuals 1 4.23 4.23
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
Error: Within
Df Sum Sq Mean Sq F value Pr(>F)
time 13 8451.5 650.1 8.7462 2.384e-06 ***
coon 1 1070.7 1070.7 14.4047 0.0008364 ***
veget:time 13 1214.4 93.4 1.2568 0.3006216
fruit:time 13 474.7 36.5 0.4912 0.9090773
time:block 26 2943.4 113.2 1.5230 0.1482787
veget:fruit:time 13 726.1 55.9 0.7514 0.6992585
veget:time:block 26 2194.9 84.4 1.1357 0.3762584
fruit:time:block 26 2672.5 102.8 1.3828 0.2103929
Residuals 25 1858.3 74.3
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
or using yours
ricsmodel<-aov(mice ~ coon + block*veget*fruit*time -
block:veget:fruit:time+ Error(block/plot), data = track)
Warning message:
In aov(mice ~ coon + block * veget * fruit * time - block:veget:fruit:time +
:
Error() model is singular
> summary(ricsmodel)
Error: block
Df Sum Sq Mean Sq
coon 1 1104.4 1104.4
block 1 3477.1 3477.1
Error: block:plot
Df Sum Sq Mean Sq
coon 1 240.13 240.13
veget 1 1629.40 1629.40
fruit 1 6.98 6.98
block:veget 2 247.59 123.79
block:fruit 2 36.97 18.49
veget:fruit 1 126.62 126.62
block:veget:fruit 1 4.23 4.23
Error: Within
Df Sum Sq Mean Sq F value Pr(>F)
coon 1 904.4 904.4 12.1673 0.001819 **
time 13 8617.8 662.9 8.9183 1.986e-06 ***
block:time 26 2945.9 113.3 1.5243 0.147803
veget:time 13 1209.2 93.0 1.2513 0.303764
fruit:time 13 477.5 36.7 0.4941 0.907294
block:veget:time 26 2201.5 84.7 1.1392 0.373409
block:fruit:time 26 2706.7 104.1 1.4006 0.201399
veget:fruit:time 13 685.2 52.7 0.7091 0.737650
Residuals 25 1858.3 74.3
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> summary(mymodel)
Thank you
Humberto
Richard M. Heiberger wrote:
>
> Your model formula cannot be correct.
>
> The phrase
> Error(block/plot, data = track)
>
> is wrong.
>
> It has to be something like this
> Error(block/plot), data = track
>
> The Error function requires a well-defined formula.
> The "," character cannot be inside the Error function.
>
>
>
> You misunderstood my use of sapply.
> I am illustrating the number of levels for each of the factors.
> That is information about the data.frame.
> It is not part of a model specification.
>
>
>
> I need reproducible code to do anything further.
> I need exactly three complete statements of the form
>
> track <- structure(....) ## from your earlier email
> mymodel <- aov( formula + Error(errorformula), data=track)
> summary(mymodel)
>
> Do not attach() anything. I am wondering now if that use of the
> attach() function in early email was part of your difficulty.
>
> When you have those three statements ready, open a fresh copy
> of R with the MSDOS command statement
>
> c:\progra~1\R\R-2.9.1\bin\Rgui --vanilla
>
> Then paste the three statements in. If that works, send the three
> statements.
>
> ______________________________________________
> R-help@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>
>
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