Hi,
On Aug 12, 2009, at 2:23 PM, Dan Kelley wrote:
I think ncdf is broken now, and so is Rnetcdf. I can't build from
source,
either. If I find a solution, I'll post it here. FYI, I have an
intel-based Mac running the latest OS and with R 2.9.1
While I haven't compiled it myself, it seems that Rnetcdf requires a
library that you probably don't have installed. Check out it's build
report:
http://www.r-project.org/nosvn/R.check/r-release-macosx-ix86/RNetCDF-00install.html
Probably it's looking for the udunits (http://www.unidata.ucar.edu/software/udunits/
(?)) library and you don't have it.
I just tried to compile ncdf on my machine, and it also failed ..
looks like you need netcdf.h. Just look at the status/reporting that
building the package gives:
....
checking netcdf.h usability... no
checking netcdf.h presence... no
checking for netcdf.h... no
checking /usr/local/include/netcdf.h usability... no
checking /usr/local/include/netcdf.h presence... no
checking for /usr/local/include/netcdf.h... no
checking /usr/include/netcdf.h usability... no
checking /usr/include/netcdf.h presence... no
...
I guess you just need to get the required libs and try again.
Or are you getting different errors?
-steve
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kettering Cancer Center
| Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact
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