dear anna,
if you are not interested in point estimate and SE of the parameter of the aforementioned categorical variable, I believe the conventional glm(..,family=binomial) is correct. In particular, the returned deviance is reliable and also it is the relevant likelihood ratio test..

hope this helps,
vito


David Winsemius ha scritto:

On Jul 13, 2009, at 5:37 AM, anna.bucharova wrote:


Dear all.
I am sort of beginner with R. I do logistic regression with binomial
response variable and several continuous and categorical variables. In one
categorical variable, zero cell occures (2x2 table looks like
7 - 0
23 - 25
This leads to overestimating of odds ratio and inflated confidence interval for odds for given variable. The variable is significant in univariate test. I do not necessarilly need odd ratio, but I need the explained deviance by
this variable and I really want to keep this variable in the model. It
probably matters for explained deviance. How to treat this problem?
Thanks for help, Anna Bucharova
--

You might consider glmrob in package:robustbase. See http://www.jstatsoft.org/v10/i04

David Winsemius, MD
Heritage Laboratories
West Hartford, CT

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Vito M.R. Muggeo
Dip.to Sc Statist e Matem `Vianelli'
Università di Palermo
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