I got the data working, but now I got another problem with KSVM: line search fails -2.793708 -0.5831701 1.870406e-05 -5.728611e-06 -5.059796e-08 -3.761822e-08 -7.308871e-13Error in prob.model(object)[[p]]$A : $ operator is invalid for atomic vectors
On Tue, Jul 7, 2009 at 6:45 PM, Steve Lianoglou<mailinglist.honey...@gmail.com> wrote: > Hi, > > On Jul 7, 2009, at 6:44 PM, Michael wrote: > >> What's wrong? Very sad about this... >> >> model <- ksvm(x=mytraindata[, -1], y=factor(mytraindata[, 1]), >> prob.model=T) >> Error in .local(x, ...) : x and y don't match. > > Same problem you're having with the svm in e1071: I bet your data is wonky. > > split your data into the x and y vars first and inspect it to make sure that > they're "clean." > > -steve > > -- > Steve Lianoglou > Graduate Student: Physiology, Biophysics and Systems Biology > Weill Medical College of Cornell University > > Contact Info: http://cbio.mskcc.org/~lianos > > > > ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
