Hi,

On Jul 2, 2009, at 10:39 AM, Mark Knecht wrote:

Hi,
  So far my plotting needs have been sort of ignored as I got
acquainted with R this week, but now that I have the basics in place
for the program I wanted to write  it's time for me to start learning
about how to make output that better suits my needs. I think I have
two sort of charts I need to concentrate on learning how to produce:

1) Probably a trivial request - a single chart that has multiple lines
on it in different colors. I might have 500 to 1000 lines, all
starting at 0,0 on the left  and proceeding to the right where they
end either above 0 or below 0. There will groups of colors depending
on the group they are part of. I'd like a legend on the right or
bottom that explains the colors. I should be able to add or remove
lines at any time.

2) The closest example of the second would be a multi-study chart sort
of like is typical in a lot of stock charting programs. Here's (I
hope) a simple example:

http://stockcharts.com/h-sc/ui?s=BAC

One thing you could do is to peruse the R Graph Gallery to see what people can do:

http://addictedtor.free.fr/graphiques/

In particular, the graph below looks *somehow* similar to the chart you link to.

http://addictedtor.free.fr/graphiques/RGraphGallery.php?graph=109

  Keep in mind I've not used any command other than plot() and par()
so far. I *very* new to this. I started looking at ggplot2 last night.
I haven't looked at Lattice.

You're looking in the right place. Here's a blog that someone is writing as they learn how to use ggplot2. His latest posts compare how to construct graphics from the lattice book " Lattice: Multivariate Data Visualization with R" using ggplot2:

http://learnr.wordpress.com/

That should be very useful.
Hope that helps,
-steve

--
Steve Lianoglou
Graduate Student: Physiology, Biophysics and Systems Biology
Weill Medical College of Cornell University

Contact Info: http://cbio.mskcc.org/~lianos/contact

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