Try TargetScan, Pictar, miRbase. These are all useful miRNA databases. Data can be downloaded as cvs or tab delimited files and parsed in R after that. In fact this may be possible with the resource you have looked at (although I haven't checked).
Cheers Iain --- On Tue, 16/6/09, David Winsemius <dwinsem...@comcast.net> wrote: From: David Winsemius <dwinsem...@comcast.net> Subject: Re: [R] R and miRecords To: mau...@alice.it Cc: r-h...@stat.math.ethz.ch Date: Tuesday, 16 June, 2009, 4:24 PM Looks like a BioConductor question. On Jun 16, 2009, at 11:05 AM, <mau...@alice.it> wrote: > I wonder whether R provides an interface to access miRecords data. > Particularly, I am looking for extracting humans miRNA and target genes > sequences. > All such information is stored in there in a set of structured web site > pages (http://mirecords.umn.edu/miRecords) > I would greatly appreciate any suggestion even about other data bases from > where it is possible to get the same sort of data. > I had a look at the database whose interface is provided by the Bioconductors > package. It seems to have a diferent contents, though. > > Thank you in advance, > Maura > > > tutti i telefonini TIM!de. David Winsemius, MD Heritage Laboratories West Hartford, CT ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]]
______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
