On Jun 11, 2009, at 12:34 PM, Alon Ben-Ari wrote:
Hello, I have openSUSE 11.1
Trying to install randomForest
as SU after invoking R install.packages("randomForest")
and I get this
* Installing *source* package randomForest ...
** libs
gcc -std=gnu99 -I/usr/lib/R/include -I/usr/local/include -fpic -
O2 -c
classTree.c -o classTree.o
gcc -std=gnu99 -I/usr/lib/R/include -I/usr/local/include -fpic -
O2 -c
regTree.c -o regTree.o
gcc -std=gnu99 -I/usr/lib/R/include -I/usr/local/include -fpic -
O2 -c
regrf.c -o regrf.o
gcc -std=gnu99 -I/usr/lib/R/include -I/usr/local/include -fpic -
O2 -c
rf.c -o rf.o
gfortran -fpic -O2 -c rfsub.f -o rfsub.o
make: gfortran: Command not found
make: *** [rfsub.o] Error 127
ERROR: compilation failed for package randomForest
* Removing /usr/lib/R/library/randomForest
The downloaded packages are in
/tmp/RtmpLEyfgR/downloaded_packages
Updating HTML index of packages in '.Library'
Warning message:
In install.packages("randomForest") :
installation of package 'randomForest' had non-zero exit status
I checked that I have th fortran library
S | Name | Summary | Type
--+---------------+------------------------------------------+--------
i | libgfortran41 | The GNU Fortran Compiler Runtime Library | package
i | libgfortran43 | The GNU Fortran Compiler Runtime Library | package
Any ideas how to solve this impass?
I have not worked on SUSE, but check to see where gfortran is located:
$ which gfortran
and be sure that it returns the path to the executable and that the
path to it is in your $PATH.
You might also want to review:
http://cran.r-project.org/doc/manuals/R-admin.html#Using-FORTRAN
HTH,
Marc Schwartz
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
