Hello!
I'm writing a script with a lot of loops and it executes really slowly over
huge amounts of data. I assume it's because I don't know how to avoid using
loops. Logical subscripts are more desirable, but I don't know how to
implement them. One example of that issue:
library(seqinr)
GCsequence <- vector()
for( i in 1:(length(data$sequence))) {
c(GCsequence,GC(s2c(data$sequence[i])))->data$GCsequence[i]
}
rm(GCsequence)
How should I speed up that?
Thank you,
Retama
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