On 13/05/2009 2:38 PM, Rebecca Sela wrote:
I am creating an R package.  I ran R CMD check on the package, and everything 
passed until it tried to run the examples.  Then, the result was:

* checking examples ... ERROR
Running examples in REEMtree-Ex.R failed.
The error most likely occurred in:

### * AutoCorrelationLRtest

flush(stderr()); flush(stdout())

### Name: AutoCorrelationLRtest
### Title: Test for autocorrelation in the residuals of a RE-EM tree
### Aliases: AutoCorrelationLRtest
### Keywords: htest tree models

### ** Examples

# Estimation without autocorrelation
simpleEMresult<-RandomEffectsTree(Y~D+t+X, data=simpleREEMdata, random=~1|ID, 
simpleREEMdata$ID)
Error: couldn't find function "RandomEffectsTree"
Execution halted


The function "RandomEffectsTree" is defined in the R code for the package.  How can I 
refer to other functions from the package in examples?  (I have the "Writing 
R-extensions" PDF, so it would be enough to point me to the right page, if the answer is in 
there and I just missed it.)

You should not need to do anything special to make package functions visible, as long as they would be visible to a normal user. (Functions not exported in the NAMESPACE file won't be visible in the examples.)

Are you sure you have a function with that exact name? It could be a typo somewhere, e.g. RandomEffectTree or RandomeffectsTree.

Duncan Murdoch

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