I am trying to fetch data using RMySQL fetch method with n=100 in this loop:
lquery = paste(query," limit 10")
input = dbGetQuery(con1,lquery)
res = dbSendQuery(con1,query)
completed = FALSE
count = 0
while (completed != TRUE) {
count = count + 1
batch = fetch(res, n = 100)
print (paste("batch",count))
input = merge(input,batch,all=TRUE)
print (paste("merge",count))
completed = dbHasCompleted(res)
}
But after a while, I get this error:
...
[1] "batch 211"
[1] "merge 211"
[1] "batch 212"
Error in rep.int(rep.int(seq_len(nx), rep.int(rep.fac, nx)), orep) :
invalid 'times' value
In addition: Warning messages:
1: In mysqlFetch(res, n, ...) :
RS-DBI driver warning: (error while fetching rows)
2: In mysqlFetch(res, n, ...) :
RS-DBI driver warning: (error while fetching rows)
>
What could be causing this? Is there any other way to do this?
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