Thanks a lot. The problem is solved. It took me a while to understand the
output from the R. With little calculation, I am able to match results from
R to SAS.


Dieter Menne wrote:
> 
> 
> Feng Jingyu wrote:
>> 
>> I used gls and it still does not provide me different estimates of
>> variance for each treatment group. Did I do anything wrong?
>> 
>> lm3<-gls(GSI~treatment,data=z,weights=varIdent(form=~treatment),method="ML")
>> 
> 
> try
> 
> weights = varIdent(form~1|treatment)
> 
> See the example in library/nlme/scripts/ch05.r ,fm1Orth.gls
> 
> Dieter
> 
> 
> 
> 
> 

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