Douglas Bates wrote:


You could use the LAPACK = TRUE argument to R's qr function to get the
unconstrained pivoting scheme and use that to get coefficient
estimates according to the estimated rank of the model matrix (see
example(qr)) but that won't give you the information needed for the
analysis of variance decompositions.

Yup. However, my gut feeling is that there could be a way out:

First, how important are (sequential) ANOVA decompositions anyway; and secondly, is it crucial that they can be read directly off the QR decomposition? There's a lot of code that assumes that this is the case, so you can't _easily_ plug in a pivoting QR, but the ANOVA can obviously be obtained by other means - basically just fit the relevant sequence of models and look at the SSD differences (as I suppose glm() must already do for deviance tables).

--
   O__  ---- Peter Dalgaard             Ă˜ster Farimagsgade 5, Entr.B
  c/ /'_ --- Dept. of Biostatistics     PO Box 2099, 1014 Cph. K
 (*) \(*) -- University of Copenhagen   Denmark      Ph:  (+45) 35327918
~~~~~~~~~~ - (p.dalga...@biostat.ku.dk)              FAX: (+45) 35327907

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