try setting the 'as.table' argument to TRUE, e.g.,
densityplot(~End-Begin | Type * Chromosome, data=Mon, layout=c(5,12),
xlab="Element Length", type="percent", col="grey60",
strip=strip.custom(style=3, bg="grey90", par.strip.text=list(cex=0.5)),
as.table = TRUE)
I hope it helps.
Best,
Dimitris
Dan Kortschak wrote:
Hi,
This is another question relating to my 2 factor figure.
densityplot(~End-Begin | Type * Chromosome, data=Mon, layout=c(5,12),
xlab="Element Length",type="percent", col="grey60",
strip=strip.custom(style=3, bg="grey90", par.strip.text=list(cex=0.5)))
I would like to flip the plot so those at the bottom are at the top and
so on. I have tried using a `index.cond=list(60:1)' (I have 3 classes
for Chromosome and 20 classes for Type) parameter - this approximates
what I want while I sort out the syntax. But I get `Error in
cond.orders(foo) : Invalid value of index.cond' returned.
The equivalent parameter for a 1x3 plot:
histogram(~Length/1000 | Chromosome, data=readlengths, layout=c(1,3),
xlab="Contig Length (kb)", nint=25, type="count", col="grey60",
index.cond=list(3:1), strip=strip.custom(bg="grey90"))
works fine, so I'm not sure where to go from here.
Any help is greatly appreciated.
thanks
Dan
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--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
Tel: +31/(0)10/7043478
Fax: +31/(0)10/7043014
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and provide commented, minimal, self-contained, reproducible code.
