On 06-Mar-09 09:25:26, Prof Brian Ripley wrote: > You might want to look into correspondence analysis, which has several > variants of PCA designed for categorical data.
In particular, have a look at the results of RSiteSearch("correspondence") Ted. > On Fri, 6 Mar 2009, Galanidis Alexandros wrote: > >> Hi all, >> >> I' m trying to figure out if it is appropriate to do a PCA having only >> categorical data (not ordinal). I have only find the following quote: >> >> One method to find such relationships is to select appropriate >> variables and >> to view the data using a method like Principle Components Analysis >> (PCA) [4]. >> This approach gives us a clear picture of the data using KL-plot of >> the PCA. >> However, the method is not settled for the data including categorical >> data. >> [http://hp.vector.co.jp/authors/VA038807/personal/covEigGiniRep17.pdf] >> >> but I'm still not sure if it WRONG to do so. > > Since normally categorical data is taken to be binomial or Poisson > distributed, the variance varies with the mean and least-squares (the > basis of PCA) is then sub-optimal. Correspondence analysis takes that > into account (at least to some extent). > >> Any opinion or reference would be very helpful > > There is a basic introduction in MASS4, with references to more > comprehensive accounts. > >> thanks >> >> ______________________________________________ >> R-help@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide >> http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. >> > > -- > Brian D. Ripley, rip...@stats.ox.ac.uk > Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ > University of Oxford, Tel: +44 1865 272861 (self) > 1 South Parks Road, +44 1865 272866 (PA) > Oxford OX1 3TG, UK Fax: +44 1865 272595 > > ______________________________________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. -------------------------------------------------------------------- E-Mail: (Ted Harding) <ted.hard...@manchester.ac.uk> Fax-to-email: +44 (0)870 094 0861 Date: 06-Mar-09 Time: 09:46:15 ------------------------------ XFMail ------------------------------ ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.