I'm trying to install the ordinal package
(http://popgen.unimaas.nl/~plindsey/rlibs.html).
I downloaded ordinal03.tgz and untarred it. rmutil was previously
installed (and appears to work ok.) Then I installed ordinal:
[r...@localhost ~]# R CMD INSTALL /home/chippy/Download/ordinal
* Installing to library '/usr/lib/R/library'
* Installing *source* package 'ordinal' ...
** libs
** arch -
gcc -m32 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic -O2
-g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector
--param=ssp-buffer-size=4 -m32 -march=i386 -mtune=generic
-fasynchronous-unwind-tables -c dist.c -o dist.o
dist.c: In function ‘evalfn’:
dist.c:119: warning: unused variable ‘nn’
dist.c: In function ‘romberg’:
dist.c:146: warning: unused variable ‘j’
dist.c:147: warning: ‘sum[0]’ may be used uninitialized in this function
dist.c:147: warning: ‘Rf_df’ may be used uninitialized in this function
gcc -m32 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic -O2
-g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector
--param=ssp-buffer-size=4 -m32 -march=i386 -mtune=generic
-fasynchronous-unwind-tables -c kord.c -o kord.o
kord.c: In function ‘pkord’:
kord.c:428: warning: suggest explicit braces to avoid ambiguous ‘else’
kord.c: In function ‘kord’:
kord.c:73: warning: ‘omega’ may be used uninitialized in this function
kord.c:73: warning: ‘b0b’ may be used uninitialized in this function
kord.c:73: warning: ‘a0a’ may be used uninitialized in this function
gcc -m32 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic -O2
-g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector
--param=ssp-buffer-size=4 -m32 -march=i386 -mtune=generic
-fasynchronous-unwind-tables -c lcr.c -o lcr.o
lcr.c: In function ‘lbr’:
lcr.c:247: warning: ‘p’ may be used uninitialized in this function
gcc -m32 -std=gnu99 -shared -L/usr/local/lib -o ordinal..so dist.o
kord.o lcr.o -L/usr/lib/R/lib -lR
** R
** data
** preparing package for lazy loading
Loading required package: rmutil
Attaching package: 'rmutil'
The following object(s) are masked from package:base :
units
** help
>>> Building/Updating help pages for package 'ordinal'
Formats: text html latex example
** building package indices ...
* DONE (ordinal)
I start up R but when I try to load ordinal I get error messages:
[r...@localhost ~]# R
R version 2.8.0 (2008-10-20)
Copyright (C) 2008 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
Natural language support but running in an English locale
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
[Previously saved workspace restored]
> library(ordinal)
Loading required package: rmutil
Attaching package: 'rmutil'
The following object(s) are masked from package:base :
units
Error in library.dynam("ordinal", pkg, lib) :
shared library 'ordinal' not found
Error in library(ordinal) : .First.lib failed for 'ordinal'
Does anyone know how to fix this?
Rick B.
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