Sorry, I meant
`[.gene`
where gene would be your new class.
-s
On Wed, Dec 24, 2008 at 11:00 AM, Stavros Macrakis <macra...@alum.mit.edu>wrote:
> You might consider using the 'bit' library and use two bits per base. You
> could then wrap this in an object with appropriate functions (bit.`[`,
> etc.).
>
> -s
>
>
> On Wed, Dec 24, 2008 at 10:26 AM, Gundala Viswanath <gunda...@gmail.com>wrote:
>
>> Dear all,
>>
>> What's the R way to compress the string into smaller 2~3 char/digit
>> length.
>> In particular I want to compress string of length >=30 characters,
>> e.g. ACGATACGGCGACCACCGAGATCTACACTCTTCC
>>
>> The reason I want to do that is because, there are billions
>> of such string I want to print out. And I need to save disk space.
>>
>> - Gundala Viswanath
>> Jakarta - Indonesia
>>
>> ______________________________________________
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>> PLEASE do read the posting guide
>> http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>>
>
>
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