On Wed, Dec 10, 2008 at 6:39 PM, Bert Gunter <gunter.ber...@gene.com> wrote:

> ...?tapply says that the first argument is an **atomic** vector. A factor
> is not an atomic vector. So tapply interprets it as such by looking only at
> its representation, which is as integer values.
>

What is the rationale for this?  If it is just backwards compatibility with
some long-ago implementation decision, perhaps tapply should be deprecated
and replaced by something cleaner (perhaps plyr).  If it is something deeper
than that, it would be useful to know what.

I admit that these details are somewhat obscure and even annoying -- but
> they **are** documented.
>

No question that it is a good thing that things like this are documented.


> I think that's all we can expect.  Some have lamented the lack of the
> language's perfect consistency in these matters, but I cannot understand how
> that would be possible given its nature, intended, as it is, to be
> **easily** used for high level data manipulation, graphics,statistical
> analysis etc. as well as programming.


As a general rule, consistency makes it *easier* to learn and use a
language.


> There are just too many possible data structures to expect logical
> consistency in their handling throughout...


I am not sure what you mean here. There has been a lot of work in the
programming language community on consistent handling of abstract structures
of various types. Some of their insights may be applicable to future
versions of R.

           -s

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