On Fri, 2008-11-14 at 08:35 -0800, Robin Clark wrote:
> Hi,
> I am attempting to set the confidence limits on a ls means plot as follows:
>
> mult<-glht(lm(effectModel, data=statdata, na.action = na.omit),
> linfct=mcp(mainEffect="Means"))
> meanPlot <- sub(".html", "meanplot.jpg", htmlFile)
> jpeg(meanPlot)
>
> plot(mult, main=NA, xlab=unlist(strsplit(Args[4],"~"))[1])
>
> This produces 95% CIs by default but I would like to produce 99% CIs - How
> do I do this?
plot(confint(mult, level = 0.99))
should do it if I understand both you and the help for multcomp
correctly.
HTH
G
>
> Thanks,
> Robin
>
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Dr. Gavin Simpson [t] +44 (0)20 7679 0522
ECRC, UCL Geography, [f] +44 (0)20 7679 0565
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