[R] JGR not launch for non-root user

Fri, 17 Oct 2008 22:08:05 -0700 

Hi there,
I am a newbie to R and just installed R 2.7.2 and JGR. As root, JGR launch successfully both in R or by a launcher (a script in shell), but it not works for non-root user. What's the cause of this issue? 

sudo update-java-alternatives -s java-6-sun
sudo R CMD javareconf
sudo R

install.packages("JGR", dep=TRUE)
library(JGR)
JGR()   # JGR launched successfully and automatically creat a script

              '/usr/local/lib/R/library/JGR/scripts/run'

quit()


now,
'sudo /usr/local/lib/R/library/JGR/scripts/run' can launch JGR.
but as a non-root user,
'/usr/local/lib/R/library/JGR/scripts/run' cannot launch it.
and as a non-root user, again, it cannot launch in R either, as below:

The 'error message' reads:


Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException

   at 
com.sun.java.swing.plaf.gtk.GTKLookAndFeel.initSystemColorDefaults(GTKLookAndFeel.java:1267)
   at 
com.sun.java.swing.plaf.gtk.GTKLookAndFeel.loadStyles(GTKLookAndFeel.java:1509)
   at 
com.sun.java.swing.plaf.gtk.GTKLookAndFeel.access$000(GTKLookAndFeel.java:37)
   at 
com.sun.java.swing.plaf.gtk.GTKLookAndFeel$WeakPCL$1.run(GTKLookAndFeel.java:1449)

   at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
   at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)

   at 
java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:273)
   at 
java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:183)
   at 
java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:173)

   at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:168)
   at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:160)
   at java.awt.EventDispatchThread.run(EventDispatchThread.java:121)

ERROR: while running main method: 
java.lang.reflect.InvocationTargetException

java.lang.reflect.InvocationTargetException
  at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)

  at 
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
  at 
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)

  at java.lang.reflect.Method.invoke(Method.java:597)
  at RJavaClassLoader.bootClass(RJavaClassLoader.java:290)
  at RJavaClassLoader.main(RJavaClassLoader.java:326)
Caused by: java.lang.NullPointerException

  at 
javax.swing.plaf.synth.SynthLookAndFeel$AATextListener.propertyChange(SynthLookAndFeel.java:793)
  at 
java.beans.PropertyChangeSupport.firePropertyChange(PropertyChangeSupport.java:339)
  at 
java.beans.PropertyChangeSupport.firePropertyChange(PropertyChangeSupport.java:347)
  at 
java.beans.PropertyChangeSupport.firePropertyChange(PropertyChangeSupport.java:276)

  at java.awt.Toolkit.setDesktopProperty(Toolkit.java:1784)

  at 
sun.awt.SunToolkit.fireDesktopFontPropertyChanges(SunToolkit.java:1714)

  at sun.awt.SunToolkit.setAAFontSettingsCondition(SunToolkit.java:1759)

  at 
sun.swing.SwingUtilities2$AATextInfo.getAATextInfo(SwingUtilities2.java:119)
  at 
com.sun.java.swing.plaf.gtk.GTKLookAndFeel.initComponentDefaults(GTKLookAndFeel.java:1258)
  at 
com.sun.java.swing.plaf.gtk.GTKLookAndFeel.getDefaults(GTKLookAndFeel.java:294)

  at javax.swing.UIManager.setLookAndFeel(UIManager.java:537)
  at javax.swing.UIManager.setLookAndFeel(UIManager.java:581)
  at org.rosuda.JGR.JGR.main(JGR.java:528)
  ... 6 more
Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException

  at 
com.sun.java.swing.plaf.gtk.GTKLookAndFeel.initSystemColorDefaults(GTKLookAndFeel.java:1267)
  at 
com.sun.java.swing.plaf.gtk.GTKLookAndFeel.loadStyles(GTKLookAndFeel.java:1509)
  at 
com.sun.java.swing.plaf.gtk.GTKLookAndFeel.access$000(GTKLookAndFeel.java:37)
  at 
com.sun.java.swing.plaf.gtk.GTKLookAndFeel$WeakPCL$1.run(GTKLookAndFeel.java:1449)

  at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
  at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)

  at 
java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:273)
  at 
java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:183)
  at 
java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:173)

  at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:168)
  at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:160)
  at java.awt.EventDispatchThread.run(EventDispatchThread.java:121)

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