On Mon, Oct 6, 2008 at 2:16 PM, Gundala Viswanath <[EMAIL PROTECTED]> wrote:
> Dear all,
>
> This is the sample of the source data (tab delimited)
>
> http://dpaste.com/82660/plain/
>
> - Gundala Viswanath
> Jakarta - Indonesia
>
Hi,
using this data, your original code works flawlessly - nothing to
correct. Perhaps you changed something between your original run and
this?
/Gustaf
-----------------------------------------------
> hm_acc <- c("XM_528056","AB002296")
> for (i in 1:length(hm_acc)){
+
+ hm_acc_id <- as.character(hm_acc[i])
+ print(hm_acc_id)
+
+ hm_allk <- grep(hm_acc_id,source$V1)
+ hm_all <- source[hm_allk,]
+
+ print(hm_all)
+ }
[1] "XM_528056"
V1 V2 V3 V4 V5 V6 V7
13 XM_528056 panTro2 chr8 + 1775569 1896107 Chimpanzee
[1] "AB002296"
V1 V2 V3 V4 V5 V6 V7
1 AB002296 panTro2 chr6 - 162615884 162626270 Chimpanzee
>
--
Gustaf Rydevik, M.Sci.
tel: +46(0)703 051 451
address:Essingetorget 40,112 66 Stockholm, SE
skype:gustaf_rydevik
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