Kiran

exonmap is a bioconductor package - I'd suggest trying the bioconductor mailing list. Also, you're more likely to get a response if you include an informative subject line.

Regards

Richard.


Kiran Annaiah wrote:
Hello,

A newbie to R. I am trying to use the exonmap package in R. According to the docs, the xmapDatabase() command should read the
config file with all the connection parameters and connect to the DB.
But i get the error shown below....

xmapDatabase("Human")
Error in mysqlNewConnection(dbDriver(drv), ...) : RS-DBI driver: (could not connect [EMAIL PROTECTED] on
dbname "NA"
Error:Access denied for user 'cagadmin'@'cdev.cag.chop.edu' to database
'NA'
)



when i connect to db using dbConnect() it works fine.
conn<-dbConnect(drv="MySQL",username="cagadmin" ....)


Anybody who can shed some light on whats going on here?

thank you all

kiran


--------------------------------------------------------
Kiran Annaiah
Center for Applied Genomics Informatics
Children's Hospital of Philadelphia
267-426-9355

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Richard D. Pearson             [EMAIL PROTECTED]
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and provide commented, minimal, self-contained, reproducible code.
  • [R] Hello, Kiran Annaiah
    • Re: [R] Hello, Richard Pearson

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