Draga, R. wrote:
.....
Would somebody know how it is possible that in SPSS we get p<0.001 and
in R we get p=0.24?

And, in 'R' the 95% CI of the Odds Ratio is 6.2-14.1. Why is the
p-value=0.24?

You asked this before and you are still not providing sufficient information.

Harold already pointed out that excluding an important variance component in SPSS could easily explain a difference in p values. However, the discrepancy between CI and p value suggests that you could be misreading the output from lmer(), and/or misspecifying the model. Now, you are simply not telling us

 - what you did
- what the data are like (esp. which variables vary within and between levels)
 - what the output was
 - which version of lmer() was used

Also you are confusing us with "variable 1", "variable 2", "variable A", and "Var B"

--
  O__  ---- Peter Dalgaard             Ă˜ster Farimagsgade 5, Entr.B
 c/ /'_ --- Dept. of Biostatistics     PO Box 2099, 1014 Cph. K
(*) \(*) -- University of Copenhagen   Denmark      Ph:  (+45) 35327918
~~~~~~~~~~ - ([EMAIL PROTECTED])              FAX: (+45) 35327907

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