It's a bug resulting from the new svyquantile() implementation. It's fixed in the development version, which you can get from r-forge here: https://r-forge.r-project.org/R/?group_id=1788
-thomas Thomas Lumley Professor of Biostatistics ________________________________________ From: Anthony Damico <ajdam...@gmail.com> Sent: Tuesday, August 2, 2022 11:49 PM To: Iulia Dumitru Cc: r-help@r-project.org; Thomas Lumley Subject: Re: [R] I don't understand the result of `svyboxplot` function from the Survey package hi, nice catch! i'm ccing the author of the survey package because this might be a issue. when i run ?svyboxplot, i also see all three boxes in the exact same place.. seems like the svyby() call inside of svyboxplot does something unexpected when svyquantile gets passed using keep.var=FALSE and ci=FALSE library(survey) data(api) dstrat <- svydesign(id = ~1, strata = ~stype, weights = ~pw, data = apistrat, fpc = ~fpc) # looks OK svyby(~enroll, ~stype, dstrat, svyquantile, quantiles = c(0, 0.25, 0.5, 0.75, 1), na.rm = TRUE) # returns each result three times in an unexpected configuration.. svyboxplot then grabs the repeated information from the first six columns svyby(~enroll, ~stype, dstrat, svyquantile, ci = FALSE, keep.var = FALSE, quantiles = c(0, 0.25, 0.5, 0.75, 1), na.rm = TRUE) On Tue, Aug 2, 2022 at 7:30 AM Iulia Dumitru <iuliadm...@gmail.com<mailto:iuliadm...@gmail.com>> wrote: After following the example given here: https://www.rdocumentation.org/packages/survey/versions/4.1-1/topics/svyhist<https://www.rdocumentation.org/packages/survey/versions/4.1-1/topics/svyhist> for `svyboxplot` I get the result in the attached image. This is a box plot of the `enroll` variable from the stratified dataset `apistrat`, grouped by `stype`: E (elementary school), M (middle school) and H (high school). If I use the `svyby` function to group the data by `stype` and find the mean for each group, I get this result: > svyby(~enroll, ~stype, dstrat, svymean) stype enroll se E E 416.78 16.41740 H H 1320.70 91.70781 M M 832.48 54.52157 Clearly the means are very different from each other. Then why don’t the box plots show this? I don’t know how to interpret the plot. Could someone please offer some insight on this? Thank you! ______________________________________________ R-help@r-project.org<mailto:R-help@r-project.org> mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help<https://stat.ethz.ch/mailman/listinfo/r-help> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html<http://www.R-project.org/posting-guide.html> and provide commented, minimal, self-contained, reproducible code. ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
