Thanks for the tip! On Tue, Jan 28, 2020 at 11:36 AM Bert Gunter <bgunter.4...@gmail.com> wrote: > > As this apparently involves genomic data, I would suggest that you ask this > on the BioConductor site: > https://www.bioconductor.org/help/ > especially if you don't get effective help here. > > Bert Gunter > > > > > On Tue, Jan 28, 2020 at 9:29 AM Ana Marija <sokovic.anamar...@gmail.com> > wrote: >> >> Hello, >> >> I tried doing: >> > library(vcfR) >> > vcf <- >> > read.vcfR("ALL.chr1.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.vcf", >> > verbose = FALSE ) >> >> but this takes forever to load and I am not sure it is even working. >> >> Any other suggestion on how I can read in .vcf file in R? >> >> Thanks >> Ana >> >> ______________________________________________ >> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code.
______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
