Hi, You might check the order of your arguments. Options come before the script filename. See the details here...
https://www.rdocumentation.org/packages/utils/versions/3.6.1/topics/Rscript Ben On Fri, Nov 22, 2019 at 8:17 PM Ana Marija <sokovic.anamar...@gmail.com> wrote: > > Hello, > > I am trying to run this code: > https://github.com/eleporcu/TWMR/blob/master/MR.R > > with r-3.6.1 > > via: > > Rscript MR.R --no-save ENSG00000154803 > > in the current directory I have saved: ENSG00000154803.ld and > ENSG00000154803.matrix as the software requires > > but I am getting this error: > > Error in file(file, "rt") : cannot open the connection > Calls: read.table -> file > In addition: Warning message: > In file(file, "rt") : > cannot open file '--no-restore.matrix': No such file or directory > Execution halted > > > Please advise, > > Thanks > Ana > > ______________________________________________ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. -- Ben Tupper Bigelow Laboratory for Ocean Science West Boothbay Harbor, Maine http://www.bigelow.org/ https://eco.bigelow.org ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
