Dear Sir,
I want to use the "prospectr" for the obtained spectra like the attached
file, "Nirspectra".
However, my understanding level of the data structure of "NIRsoil" is not yet
enough.
reference:
https://cran.r-project.org/web/packages/prospectr/vignettes/prospectr-intro.pdf
data(NIRsoil)str(NIRsoil) -----> A little complicated for me.
I have 2 questions.
I want to make the data structure of "Nirspectra" to be applied directly for
"prospectre".
1. Please tell me the detail way for giving suitable data structure toward
"Nirspectra".
abc<-read.csv('Nirspectra.csv')
-------------------------------------------------------------------------------
My estimation of the final data sturucture of "Nirspectra" for the direct use
of "prospectr"
'data.frame': 57 obs. of 3 variables: $ train: num 1 1 0 1 1 0 1 1 0 1
... $ dep : num 87.300003 87 87.099998 89.699997 84.900002 84.699997
89.300003... $ spc : num [2:58, 1:36] ...
2. Which is right, num [2:58, 1:36] or num [1:58, 1:36] ?
Best Regards,
name,900,920,940,960,980,1000,1020,1040,1060,1080,1100,1120,1140,1160,1180,1200,1220,1240,1260,1280,1300,1320,1340,1360,1380,1400,1420,1440,1460,1480,1500,1520,1540,1560,1580,1600,train,dep
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S040,0.22116,0.242107,0.217501,0.204667,0.203692,0.212268,0.224525,0.217164,0.213186,0.208124,0.206242,0.220177,0.342382,0.403429,0.540509,0.719601,0.483002,0.309594,0.254858,0.227015,0.223944,0.223193,0.235272,0.363954,0.585406,0.640875,0.542081,0.463745,0.375368,0.343955,0.314005,0.269109,0.247675,0.23992,0.246731,0.262614,0,87.599998
S041,0.219997,0.241066,0.216344,0.203275,0.202247,0.210819,0.223189,0.21597,0.211814,0.206789,0.204764,0.217958,0.333719,0.402284,0.543938,0.723681,0.487812,0.310268,0.254383,0.225939,0.222687,0.221648,0.233724,0.363079,0.586227,0.642111,0.543866,0.463559,0.374979,0.342873,0.312541,0.268054,0.246472,0.238637,0.245247,0.260649,1,86.800003
S042,0.221738,0.242463,0.218349,0.20549,0.204588,0.212834,0.224899,0.218038,0.213974,0.208729,0.207251,0.221479,0.349602,0.40627,0.536627,0.716638,0.486689,0.308616,0.254414,0.227464,0.224755,0.223836,0.236398,0.359436,0.575573,0.632983,0.539938,0.460754,0.373274,0.342752,0.311069,0.269034,0.248647,0.240157,0.24622,0.261457,1,86.300003
S043,0.220724,0.241865,0.21721,0.204225,0.203427,0.211926,0.224163,0.216996,0.21285,0.207662,0.205751,0.219187,0.340489,0.403707,0.540148,0.722661,0.487425,0.308485,0.254104,0.226589,0.223594,0.222623,0.234613,0.361657,0.582747,0.639386,0.542676,0.462931,0.374358,0.342396,0.312133,0.268544,0.247349,0.239145,0.245301,0.260776,0,86.900002
S045,0.22182,0.242893,0.21846,0.205476,0.204598,0.213027,0.22519,0.218192,0.214092,0.208916,0.207185,0.221003,0.346544,0.405789,0.538304,0.719967,0.487611,0.308217,0.254443,0.227444,0.22482,0.223853,0.236203,0.361103,0.579237,0.636319,0.541651,0.462266,0.374474,0.342857,0.3119,0.269427,0.248772,0.240343,0.246276,0.261521,1,86.900002
S046,0.2218,0.242947,0.21845,0.205484,0.204531,0.212975,0.225155,0.218097,0.213973,0.208701,0.206931,0.220636,0.345032,0.405472,0.539114,0.721058,0.488128,0.308499,0.254525,0.227431,0.224617,0.22375,0.235974,0.361041,0.580018,0.636986,0.541951,0.462497,0.374523,0.34291,0.312191,0.269477,0.248665,0.240143,0.246256,0.261557,1,87.099998
S047,0.215904,0.238879,0.213811,0.19952,0.198404,0.206908,0.219657,0.213022,0.20849,0.203222,0.201039,0.213003,0.320266,0.393778,0.541538,0.737675,0.512138,0.310287,0.252649,0.223,0.219489,0.217822,0.228878,0.354504,0.580368,0.643378,0.548589,0.465856,0.373145,0.338327,0.308097,0.266377,0.244816,0.234741,0.239916,0.254669,0,83.699997
S048,0.220846,0.241996,0.217186,0.204204,0.203313,0.211889,0.224227,0.21704,0.212919,0.2078,0.20593,0.21937,0.3395,0.403102,0.541341,0.722996,0.48768,0.309213,0.254441,0.226596,0.223516,0.22266,0.234707,0.362703,0.584625,0.641586,0.543421,0.463964,0.375112,0.342906,0.312927,0.268898,0.247538,0.239252,0.245692,0.261224,1,87
S049,0.224372,0.245076,0.221096,0.208191,0.207385,0.215705,0.227606,0.220865,0.216799,0.211484,0.209969,0.224161,0.354684,0.409508,0.538028,0.718126,0.489153,0.310198,0.256541,0.229931,0.227466,0.226565,0.239232,0.361305,0.575893,0.632896,0.54124,0.462465,0.375658,0.344929,0.313311,0.271746,0.251579,0.242991,0.248755,0.263903,1,86.800003
S050,0.220451,0.241606,0.216618,0.203676,0.202827,0.211511,0.223944,0.21648,0.212428,0.20734,0.20537,0.218481,0.336076,0.402523,0.543458,0.723024,0.484717,0.309364,0.254411,0.226225,0.223065,0.222204,0.234165,0.364487,0.58806,0.644058,0.543369,0.464132,0.375185,0.343183,0.313449,0.268385,0.24666,0.238834,0.245438,0.261058,0,87.400002
S051,0.226149,0.245294,0.220593,0.209839,0.209376,0.218137,0.229808,0.221326,0.217871,0.213021,0.211486,0.227087,0.376695,0.412077,0.534226,0.689885,0.442443,0.30144,0.253859,0.22861,0.22773,0.227974,0.24133,0.374582,0.589324,0.633767,0.52603,0.457086,0.372594,0.346305,0.31678,0.269696,0.248465,0.243042,0.251011,0.268443,1,91.800003
S054,0.225905,0.245053,0.220294,0.209381,0.208912,0.217591,0.229319,0.22081,0.217335,0.212487,0.210992,0.226472,0.375308,0.41132,0.534472,0.690027,0.442386,0.301204,0.253567,0.228264,0.227268,0.227545,0.240779,0.374469,0.589982,0.634261,0.52623,0.457158,0.37243,0.346,0.316469,0.269424,0.248147,0.242703,0.250642,0.267911,1,91.900002
S055,0.217904,0.240306,0.215634,0.201516,0.200388,0.208864,0.221406,0.214776,0.210347,0.204939,0.202999,0.215536,0.327723,0.397231,0.541813,0.734625,0.508417,0.311114,0.253884,0.225141,0.221286,0.219738,0.231036,0.35588,0.579003,0.640715,0.547061,0.465265,0.373805,0.339955,0.309207,0.267562,0.246309,0.23652,0.24186,0.256644,0,84.5
S056,0.216262,0.239073,0.214112,0.199719,0.19856,0.207117,0.219814,0.213194,0.208685,0.203407,0.201221,0.213133,0.320307,0.394361,0.542404,0.738309,0.511889,0.310121,0.252747,0.223063,0.219521,0.217923,0.228989,0.355171,0.581124,0.643757,0.549221,0.466061,0.373326,0.338537,0.308236,0.266355,0.244877,0.234739,0.239989,0.254728,1,83.900002
S057,0.216419,0.239191,0.214328,0.199919,0.198796,0.207369,0.220127,0.213557,0.209036,0.203746,0.201567,0.213603,0.321015,0.394488,0.542569,0.73838,0.51263,0.310639,0.253174,0.223525,0.219998,0.218245,0.229356,0.355317,0.58113,0.643871,0.549118,0.466355,0.373737,0.338964,0.308702,0.266873,0.245269,0.235243,0.240312,0.255144,1,83.900002
S059,0.222625,0.243366,0.219073,0.206232,0.205347,0.213811,0.225891,0.218841,0.214773,0.209573,0.207902,0.221958,0.349609,0.406524,0.538885,0.7176,0.484995,0.308546,0.255153,0.228036,0.225488,0.224637,0.237113,0.362717,0.580368,0.63649,0.540829,0.462443,0.374721,0.343719,0.312708,0.270022,0.249225,0.240893,0.247208,0.262725,0,87.300003
S060,0.22574,0.244894,0.220095,0.209224,0.20881,0.217618,0.229462,0.220927,0.217393,0.212551,0.210966,0.226293,0.373791,0.411068,0.534906,0.691441,0.443654,0.301171,0.253711,0.228182,0.227218,0.227505,0.240694,0.374894,0.591062,0.635272,0.526871,0.457539,0.372681,0.345908,0.316715,0.269424,0.24805,0.242542,0.250505,0.268044,1,92.099998
S090,0.208801,0.227031,0.203351,0.194583,0.190758,0.199805,0.212378,0.204618,0.200289,0.194927,0.191919,0.202528,0.298862,0.380207,0.573844,0.708733,0.494086,0.304763,0.24837,0.218968,0.212838,0.212173,0.227901,0.38931,0.622006,0.722127,0.658352,0.559222,0.494172,0.482606,0.474964,0.447442,0.435949,0.439236,0.461559,0.466698,1,92.300003
S092,0.211632,0.227863,0.205503,0.19831,0.195752,0.203582,0.215204,0.207415,0.203379,0.197918,0.195822,0.209971,0.34154,0.38631,0.558057,0.679027,0.469306,0.299185,0.247563,0.221213,0.217532,0.217518,0.235064,0.389387,0.607236,0.700239,0.669508,0.557662,0.490249,0.48174,0.470696,0.444606,0.434707,0.437466,0.458567,0.463647,0,94.099998
S093,0.214526,0.226807,0.204416,0.193084,0.193359,0.20225,0.213677,0.205512,0.20162,0.195921,0.194371,0.209273,0.344491,0.391885,0.581695,0.651442,0.43945,0.280692,0.23477,0.211539,0.209472,0.209622,0.224415,0.390029,0.610678,0.624083,0.518197,0.450237,0.359281,0.331924,0.296309,0.253377,0.232059,0.226149,0.234744,0.251611,1,93.300003
S096,0.21811,0.23217,0.210674,0.205226,0.203325,0.211216,0.222217,0.212999,0.209491,0.204197,0.202477,0.218985,0.37783,0.392984,0.550314,0.648159,0.437277,0.295033,0.248982,0.224801,0.222875,0.223805,0.242714,0.400896,0.610783,0.696058,0.679303,0.561974,0.492815,0.487999,0.476175,0.447271,0.437471,0.441561,0.463058,0.468497,1,97.800003
S099,0.209508,0.227623,0.202473,0.189306,0.188533,0.197863,0.210543,0.202635,0.198195,0.19269,0.190325,0.20221,0.30433,0.384095,0.574786,0.7076,0.479712,0.292064,0.23909,0.211506,0.207401,0.20635,0.218459,0.374699,0.6062,0.637494,0.529458,0.455404,0.361313,0.32645,0.296291,0.253601,0.231084,0.223046,0.23031,0.246051,0,88.300003
S103,0.211689,0.22598,0.202106,0.190811,0.190887,0.20049,0.212799,0.2038,0.199868,0.19449,0.192333,0.20577,0.324469,0.388748,0.580923,0.669308,0.440722,0.283761,0.236133,0.210852,0.208286,0.208531,0.22246,0.392053,0.620778,0.638118,0.521936,0.452825,0.361058,0.33094,0.299522,0.252585,0.22995,0.22505,0.234656,0.252003,1,93.699997
S104,0.216016,0.2301,0.20861,0.203055,0.200924,0.20882,0.219845,0.210561,0.207039,0.201711,0.200051,0.216784,0.377472,0.389528,0.546384,0.644694,0.434551,0.2921,0.246125,0.221921,0.220151,0.221132,0.239752,0.397192,0.606661,0.692276,0.671981,0.554187,0.483898,0.477517,0.465117,0.435517,0.425143,0.428329,0.449473,0.455562,1,97.5
S105,0.219035,0.231055,0.20875,0.198733,0.199115,0.208036,0.21901,0.209831,0.206335,0.200883,0.19982,0.217416,0.382823,0.394987,0.559249,0.630563,0.412908,0.277167,0.235804,0.213958,0.213715,0.214452,0.229831,0.390001,0.600724,0.614574,0.503426,0.443345,0.355574,0.330901,0.297883,0.253983,0.232745,0.227952,0.237419,0.255542,0,95
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