> On Oct 31, 2018, at 11:30 AM, peter dalgaard <pda...@gmail.com> wrote:
>
> Hm, a source install to r-devel gave me
>
> Peter-Dalgaards-MacBook-Air:BUILD pd$ ls -l library/pkgconfig/R/pkgconfig.rdb
> -rw-r--r-- 1 pd staff 4515 Oct 31 19:15 library/pkgconfig/R/pkgconfig.rdb
> Peter-Dalgaards-MacBook-Air:BUILD pd$ ls -l
> library/pkgconfig/help/pkgconfig.rdb
> -rw-r--r-- 1 pd staff 5748 Oct 31 19:15
> library/pkgconfig/help/pkgconfig.rdb
>
> and an install to R_3.4.1 (yes, 4...) said
>
> $ ls -l
> /Library/Frameworks/R.framework/Versions/3.4/Resources/library/pkgconfig/*/pkgconfig.rdb
> -rw-r--r-- 1 pd admin 2432 Aug 17 11:36
> /Library/Frameworks/R.framework/Versions/3.4/Resources/library/pkgconfig/R/pkgconfig.rdb
> -rw-r--r-- 1 pd admin 5412 Aug 17 11:36
> /Library/Frameworks/R.framework/Versions/3.4/Resources/library/pkgconfig/help/pkgconfig.rdb
>
> I.e., it looks like it is the larger of your file sizes that is anomalous(?).
>
> Did you try a straight install with install.packages("pkgconfig")?
>
> And, BTW, which system are you using?
>
> -pd
>
>> On 31 Oct 2018, at 08:22 , Patrick Connolly <p_conno...@slingshot.co.nz>
>> wrote:
>>
>>
>> I got this message while using a dplyr mutate call:
>>
>> Error in get0(oNam, envir = ns) :
>> lazy-load database
>> '/home/hrapgc/local/R-3.5.1/library/pkgconfig/R/pkgconfig.rdb' is corrupt
>>
>> I had only just installed R-3.5.1 and updated the packages (using the
>> function update.packages with the checkBuild parameter to TRUE) in the
Did you misspell "checkBuilt"? You should always present the transcript to
prevent such questions.
--
David.
>> library I use with that version. So, I checked the size of
>> pkgconfig.rdb with the previous version from the bash prompt:
>>
>>> ll `locate pkgconfig.rdb`
>>
>> -rw-r--r-- 1 hrapgc hrapgc 5335 May 8 14:06
>> /home/hrapgc/local/R-3.5.0/library/pkgconfig/help/pkgconfig.rdb
>> -rw-r--r-- 1 hrapgc hrapgc 15669 May 8 14:06
>> /home/hrapgc/local/R-3.5.0/library/pkgconfig/R/pkgconfig.rdb
>> -rw-r--r-- 1 hrapgc hrapgc 5359 Oct 31 16:12
>> /home/hrapgc/local/R-3.5.1/library/pkgconfig/help/pkgconfig.rdb
>> -rw-r--r-- 1 hrapgc hrapgc 4367 Oct 31 16:12
>> /home/hrapgc/local/R-3.5.1/library/pkgconfig/R/pkgconfig.rdb
>>
>> While the pkgconfig.rdb filesize in the help directory is nearly
>> identical in size to that in R-3.5.0 (and previous versions) the one
>> in the R directory is very much smaller. So the error message
>> probably makes sense.
>>
>> The question is: how could that have happened? I removed the package
>> and reinstalled it, but that made no difference. Is this documented
>> anywhere?
>>
>> TIA
>> --
>> ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.
>> ___ Patrick Connolly
>> {~._.~} Great minds discuss ideas
>> _( Y )_ Average minds discuss events
>> (:_~*~_:) Small minds discuss people
>> (_)-(_) ..... Eleanor Roosevelt
>>
>> ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.
>>
>> ______________________________________________
>> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>
> --
> Peter Dalgaard, Professor,
> Center for Statistics, Copenhagen Business School
> Solbjerg Plads 3, 2000 Frederiksberg, Denmark
> Phone: (+45)38153501
> Office: A 4.23
> Email: pd....@cbs.dk Priv: pda...@gmail.com
>
> ______________________________________________
> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
______________________________________________
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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