That sounds like a good thing to check, but what permissions should I be checking? I'm not very familiar with how the compiler works -- is it creating temp files somewhere that I should check? If you have a suggestion for a directory or two that seem like good candidates, I can play around with the permissions, but I don't really want to start messing around with my entire C: drive or whatever.
Thanks, Jeff On Thu, Jan 26, 2017 at 1:25 PM, Bert Gunter <bgunter.4...@gmail.com> wrote: > Check your permissions? They may be denying your process access. > > Cheers, > Bert > Bert Gunter > > "The trouble with having an open mind is that people keep coming along > and sticking things into it." > -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) > > > On Wed, Jan 25, 2017 at 3:23 PM, Jeff Hughes <jeff.hug...@gmail.com> > wrote: > > Hi there, > > > > I have been getting an irritating error when trying to use the "caret" > > package on one of my machines. Whenever I train any model whatsoever, it > > comes back with this error: > > > > Warning: namespace ‘compiler’ is not available and has been replaced > > by .GlobalEnv when processing object ‘sep’ > > Error in comp(expr, env = envir, options = list(suppressUndefined = > TRUE)) > > : > > could not find function "makeCenv" > > > > As a result, the model does not work, and I am unable to use the caret > > package. As an example, here is some code that causes the error, though > it > > has happened in every case I have tried: > > > > library(caret) > > fit.knn <- train(Species ~ ., data=iris, method="knn") > > > > I have tried reinstalling the caret package; I have tried reinstalling > R; I > > have tried updating all of my packages; nothing has worked. What's more, > > this machine is running Windows 10, and I have successfully run the same > > code on two other machines running the same version of Windows, the same > > version of R, and the same version of the caret package. I have also only > > run into it when using caret, but I don't think the error lies within > that > > package itself. > > > > Here is my sessionInfo() after running the above code in a new R session: > > > > R version 3.3.2 (2016-10-31) > > Platform: x86_64-w64-mingw32/x64 (64-bit) > > Running under: Windows >= 8 x64 (build 9200) > > > > locale: > > [1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United > > States.1252 LC_MONETARY=English_United States.1252 > > [4] LC_NUMERIC=C LC_TIME=English_United > > States.1252 > > > > attached base packages: > > [1] stats graphics grDevices utils datasets methods base > > > > other attached packages: > > [1] caret_6.0-73 ggplot2_2.2.1 lattice_0.20-34 > > > > loaded via a namespace (and not attached): > > [1] Rcpp_0.12.8 magrittr_1.5 splines_3.3.2 MASS_7.3-45 > > munsell_0.4.3 colorspace_1.3-2 > > [7] foreach_1.4.3 minqa_1.2.4 stringr_1.1.0 car_2.1-4 > > plyr_1.8.4 tools_3.3.2 > > [13] parallel_3.3.2 nnet_7.3-12 pbkrtest_0.4-6 grid_3.3.2 > > gtable_0.2.0 nlme_3.1-128 > > [19] mgcv_1.8-16 quantreg_5.29 e1071_1.6-7 > class_7.3-14 > > MatrixModels_0.4-1 iterators_1.0.8 > > [25] lme4_1.1-12 lazyeval_0.2.0 assertthat_0.1 tibble_1.2 > > Matrix_1.2-7.1 nloptr_1.0.4 > > [31] reshape2_1.4.2 ModelMetrics_1.1.0 codetools_0.2-15 > stringi_1.1.2 > > scales_0.4.1 stats4_3.3.2 > > [37] SparseM_1.74 > > > > Note that the "compiler" package is not loaded for some reason, which I > > think it should be (the other machines on which this runs successfully > have > > it loaded). But the compiler package is built-in, so I can't seem to > find a > > way to load it manually. > > > > This one has really stumped me, and there are very few relevant hits on > > Google. Any help would be much appreciated! > > > > Jeff > > > > [[alternative HTML version deleted]] > > > > ______________________________________________ > > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide http://www.R-project.org/ > posting-guide.html > > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
