Martin Morgan wrote:
Hi Rajasekaramya
sapply(geneset[1:5431], "[[", "V1")
or
Bioconductor::subListExtract(geneset[1:5431], "V1")
oops, I meant using the 'Biobase' package from Bioconductor, e.g.,
> library(Biobase)
> subListExtract(geneset[1:5431], "V1")
Sorry for the confusion,
Martin
Martin
Rajasekaramya wrote:
Hi,
I have a problem in assessing the list element.
i have list called geneset it contains the following elements
> geneset
[[1]]
V1 V2 V3 .......V200
Genename gene1 gene2....gene200
[[2]]
V1 V2 V3 V4...V[240]
Genename gene1 gene2....gene240
:
:
:
:
: [[5431]]
i want to get V1 values for all the elements(1:5431) in the geneset in a
may be in a vector or in any other form
Ramya Thulasingam
--
Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109
Location: Arnold Building M2 B169
Phone: (206) 667-2793
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