Hi,
I used the "axis()" suggested by Jim as follows and it worked:
#Plots average A/Ci for each day from ACi
#Parameters of the panels
par(mfcol=c(3,2), #row,col
mar=c(2,2,1,1), #inner margin (bottom, left, top, right)
oma=c(4,4,1,1), #outer margin (bottom, left, top, right)
omd=c(0.1,0.8,0.1,0.95), #outer dimensions, values {0-1}, (x1, x2, y1, y2)
xpd=NA)
#PAR = 1000, Day0
with(subset1000_0,
lineplot.CI(x.factor=Ci.average,
response=Photo,
group=Treatment,
ylab=NA,
xlab=NA,
legend=TRUE,
x.leg=1000,
y.leg=18,
type="p",
x.cont=TRUE, #continuous x axis (spacing proportional to
values)
xaxt='n', #remove x axis labels
xlim=c(0,1150), #range x axis
ylim=c(1,45), #range y axis
err.width=0.05,
pch = c(16,16,16), #symbols shape
col=c("gray84","black","gray48"),
fun=
))
mtext("Day0, PAR=1000", side = 3, line= -1, adj=0, at=1, cex=0.6) #subtitle
axis(1, at=c(0,25,50,100,150,200,300,400,500,600,700,800,900,1000,1100),
labels=NULL) #replace xaxes with desired values
Thanks everyone,
Clem
-----Original Message-----
From: Jim Lemon [mailto:drjimle...@gmail.com]
Sent: Sunday, 3 July 2016 7:04 PM
To: Clemence Henry
Cc: r-help@r-project.org
Subject: Re: [R] lineplot.CI xaxis scale change in sciplot?
Hi Clemence,
I don't have sciplot installed, but the help page suggests that the "xaxt"
argument is available. This will prevent the x axis from being displayed and
you can then specify the x axis you want. Assume that you want an x axis from 0
to 300 by 50:
axis(1,at=seq(0,300,by=50))
Jim
On Thu, Jun 30, 2016 at 12:04 PM, Clemence Henry <c.he...@westernsydney.edu.au>
wrote:
> Hi,
>
> I am trying to change the values of the tick marks on the xaxis of the
> following multipanel plot (see relevant bits of script below) to increments
> of 50 or to a custom scale (ie. 50, 100, 150, 200, 300...).
> So far I tried using xaxp or xlim both in par() or lineplot.CI(), as well as
> axTicks and axisTicks but did not get it to work.
> Suggestions?
>
> #Plots average A/Ci for each day from ACi #Parameters of the panels
> par(mfcol=c(3,2), #row,col
> mar=c(2,2,1,1), #inner margin (bottom, left, top, right)
> oma=c(4,4,1,1), #outer margin (bottom, left, top, right)
> omd=c(0.1,0.8,0.1,0.95), #outer dimensions, values {0-1}, (x1, x2, y1, y2)
> xpd=NA)
>
> ...
>
>
> #PAR = 1000, Day2
> with(subset1000_2,
> lineplot.CI(x.factor=Ci.average,
> response=Photo,
> group=Treatment,
> ylab=NA,
> xlab=NA,
> legend=FALSE,
> type="p",
> x.cont=TRUE, #continuous x axis (spacing proportional to
> values)
> ylim=c(1,45), #range y axis
> err.width=0.05,
> pch = c(16,16,16), #symbols shape
> col=c("gray84","black","gray48"),
> fun=
> ))
> mtext("Day2, PAR=1000", side = 3, line= -1, adj=0, at=1, cex=0.6)
> #subtitle
>
> ....
>
> #legends
> mtext("Ci", side = 1, line= 1, outer = TRUE, cex=0.7) #x legend
> mtext("Photosynthetic rate", side = 2, line= 1, outer = TRUE, cex=0.7)
> #y legend Thank you kindly for your support.
>
> Clemence
>
> [[alternative HTML version deleted]]
>
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> and provide commented, minimal, self-contained, reproducible code.
______________________________________________
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
