I try to create a dot plot loop for 6 protein, that mean that i want to do
dot plot to 36 pairs of protein in a loop
library(seqinr)
Seq1 <- read.fasta(file ="C:/D.fasta")
Protinename1 <- Seq1[[1]]
Protinename2 <- Seq1[[2]]
Protinename3 <- Seq1[[3]]
Protinename4 <- Seq1[[4]]
Protinename5 <- Seq1[[5]]
Protinename6 <- Seq1[[6]]
dotPlot(Protinename1 , Protinename3)

i have no idea how to create a loop for this script

thank you for your help

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