Hi, Dr. Gu,
Thank you very much for the answer. This trick works.
Another question, is there a way to change the color or the axis?
Thanks!
On Monday, December 15, 2014 1:39 PM, "Gu, Zuguang"
<z...@dkfz-heidelberg.de> wrote:
Hi,
In current version, `labels.font` in `circos.axis` can only be a scalar ( a
vector with length one).
But you can first add axes with no labels and then add labels by `circos.text`:
female.f = c("a", "b")
circos.initialize(factors=female.f, xlim=c(1.8,6.2))
circos.trackPlotRegion(factors=female.f, ylim=c(-1.3,1.8),track.height=0.5,
panel.fun=function(x,y) {
circos.axis(h = "top", major.at=c(2:6),minor.ticks=0,labels= rep("",
5),labels.cex=0.8,major.tick.percentage=0.02,
direction="inside")
circos.text(2:6, rep(1.5, 5), c("L3","72hL3","72hL4","8dF","16dF"),
font = c(1, 2, 1, 1, 1), facing = "inside", niceFacing = TRUE)
})
best,
Zuguang
________________________________________
Sent: 15 December 2014 17:41
To: r-help@r-project.org; Gu, Zuguang
Subject: circlize package: different font size for axis labels
Hi, Dr. Gu,
I am trying to highlight some axis labels, for example, "72hL3" as bold, using
the following command:
circos.initialize(factors=female.f, xlim=c(1.8,6.2))
circos.trackPlotRegion(factors=female.f,
ylim=c(-1.3,1.8),track.height=0.5,panel.fun=function(x,y){circos.axis(major.at=c(2:6),minor.ticks=0,labels=c("L3","72hL3","72hL4","8dF","16dF"),labels.cex=0.8,major.tick.percentage=0.02,h="bottom",
direction="inside", labels.font=c(1,2,1,1,1,1))})
Is there a way to do this using circlize package?
Thanks!
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