I have a bit of trouble here to program in r. I am anew user but i really enjoy 
working with it.I have a large number of variables in a matrix that are 
arranged sequentially on a line (chromosome). This order has to be maintained 
whatsoever. I am to develop an r algorithm that will develop groups as 
follows;i) Calculate the correlation between successive variables and 
correlation matrix for all the variables
ii) if r(i) is the maximum correlation coefficient in the successive variable 
correlation then my first group has variables [x(i-k ), ...x(i),... x(i+k )]. 
this gives me group one of size 2k+1. note that variables are picked on that 
line and order is maintained.iii) we check for remaining correlation btn 
successive variables relative to the bigger correlation matrix and select  
other groups. these groups don't need to be of same size and they must not 
overlap.i will have divided in to disjoint groups but maintaining the 
order.kindly assist me see how i can get this done, thanks

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