Run the sessionInfo() command in R, as the posting guide requests!
Jason Lee wrote:
Hi,
I am not too sure its what you meant :-
Below is the closest data for each session from "top"
PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND
26792 jason 25 0 283m 199m 2620 R 100 0.6 0:00.38 R
The numbers changed as the processes are running. I am actually sharing
the server with other few people. I dont think this is a problem.
And, for my own pc,
PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND
6192 jason 25 0 157m 148m 2888 R 100 14.8 1081:21 R
On Fri, Jun 6, 2008 at 12:46 PM, Erik Iverson <[EMAIL PROTECTED]
<mailto:[EMAIL PROTECTED]>> wrote:
And what is your sessionInfo() in each case!
Jason Lee wrote:
Hi,
I query free -m,
On my server it is,
total used free shared buffers
cached
Mem: 32190 8758 23431 0 742
2156
And on my pc,
total used free shared buffers
cached
Mem: 1002 986 16 0 132
255
On the server, the above figure is after I exited the R.
It seems that there are still alot free MB available if I am not
wrong.
On Fri, Jun 6, 2008 at 12:29 PM, Erik Iverson
<[EMAIL PROTECTED] <mailto:[EMAIL PROTECTED]>
<mailto:[EMAIL PROTECTED]
<mailto:[EMAIL PROTECTED]>>> wrote:
How much RAM is installed in your Sun Solaris server? How
much RAM
is installed on your PC?
Jason Lee wrote:
Hi,
I am actually trying to do some matrix multiplications of
large
datasets of 3000 columns and 150 rows.
And I am running R version 2.7.0. <http://2.7.0.>
<http://2.7.0.> <http://2.7.0.>
I tried setting R --min-vsize=10M --max-vsize=100M
--min-nsize=500k --max-nsize=1000M
Yet I still get:-
Error: cannot allocate vector of size 17.7 Mb
I am running on Sun Solaris server.
Please advise.
Thanks.
On Fri, Jun 6, 2008 at 11:50 AM, Erik Iverson
<[EMAIL PROTECTED]
<mailto:[EMAIL PROTECTED]>
<mailto:[EMAIL PROTECTED] <mailto:[EMAIL PROTECTED]>>
<mailto:[EMAIL PROTECTED]
<mailto:[EMAIL PROTECTED]>
<mailto:[EMAIL PROTECTED]
<mailto:[EMAIL PROTECTED]>>>> wrote:
Jason Lee wrote:
Hi R-listers,
I have problem in executing my R on server. It
returns me
Error: cannot allocate vector of size 15.8 Mb
each time when i execute R on the server. But it
doesnt
give me
any problem
when i try executing on my own Pc (except it runs
extremely slow).
Any pointers to this? I tried to read the FAQ on
this issue
before in the
archive but it seems there is no one solution to this.
And that is because there is no one cause to this
issue. I might
guess your 'server' has less memory than your 'PC',
but you
didn't
say anything your respective setups, or what you are even
trying to
do with R.
I tried to
simplified my code but it seems the problem is
still the
same.
Please advise. Thanks.
[[alternative HTML version deleted]]
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