I'm trying to get my figure to open with R, but it does not come up.
Here is my standard code:
venn.diagram(
x = list(
KP2 = c(2, 62, 22, 33, 11, 36, 26, 27, 28, 64, 5, 66, 10, 18,
68, 61, 6,
29, 19, 65, 30, 35, 32, 20, 69, 8, 31, 13, 21, 7),
KP15 = c(2, 22, 39, 1, 14, 65, 67, 68, 1, 12, 23, 37, 4, 24,
25, 64, 52,
34, 9, 15, 13, 8, 16, 63, 3, 17),
KP43 = c(39, 2, 49, 43, 51, 38, 56, 58, 60, 44, 54, 40, 50, 45,
57, 59,
46, 41, 47, 48, 42, 55, 53)
),
filename = "location\\nifH_AA_alles.jpg" ,
col = "transparent",
fill = c("red", "blue", "green"),
alpha = 0.5,
label.col = c("darkred", "white", "darkblue", "white", "white", "white",
"darkgreen"),
cex = 2.5,
fontfamily = "serif",
fontface = "bold",
cat.default.pos = "text",
cat.col = c("darkred", "darkblue", "darkgreen"),
cat.cex = 2.5,
cat.fontfamily = "serif",
cat.dist = c(0.3, 0.4, 0.27),
cat.pos = 0
);
This code saves the file to the desired location. However, I want the plot
to open in the R interface, so I changed that line of the code to
"filename=NULL". When I run the script afterwards, the plot does not open,
instead, I get the following outputline:
(polygon[GRID.polygon.1], polygon[GRID.polygon.2], polygon[GRID.polygon.3],
polygon[GRID.polygon.4], polygon[GRID.polygon.5], polygon[GRID.polygon.6],
text[GRID.text.7], text[GRID.text.8], text[GRID.text.9], text[GRID.text.10],
text[GRID.text.11], text[GRID.text.12], text[GRID.text.13],
text[GRID.text.14])
Could anyone help me adapt the code so I get the plot opened in R?
Many thanks in advance,
Guillaume
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