But then how do you know which allele is the reference and which the risk allele (between A/T/C/G)?
2014-05-26 1:41 GMT+01:00 David Duffy <david.du...@qimr.edu.au>: > francesca casalino <francy.casal...@gmail.com> asked: > > >> Does anyone know how to find the reference allele used for genetic >> associations ran in snpStats? >> >> A is ref allele, B is risk allele. > > > > [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.