Here is a working example with no random parts. Thanks for your patience and if I'm still off the mark with my presentation I'll drop the matter.
v <- c(NA, 1.5, NA, NA, NA, 1.1, 0.5, NA, NA, 1.3, 0.4, 0.9) a1 <- array(v, dim=c(2,2,3)) m1 <- matrix(c(NA, 1.5, 2.1, NA), ncol=2, byrow=T) m2 <- matrix(c(1.56, 1.64, 1.16, 2.92), ncol=2) condition1 <- !is.na(m1)& m1 > m2 ans <- matrix(NA, ncol=2, nrow=2) # initialize for(i in 1:2) { for(j in 1:2) { ind.not.na <- which(!is.na(a1[i,j,])) if(condition1[i,j] && length(ind.not.na) > 0) ans[i,j] <- a1[i,j,ind.not.na[1]] + m2[i,j] } } ans [,1] [,2] [1,] NA 1.66 [2,] 3.14 NA Let me try asking again in words. If I have multiple matrices or slices of 3d arrays that are the same dimension, is there a way to pass them all to apply, and have apply take care of looping through i,j? I understand that apply has just one input object x. I want to work on more than one array object at once using a custom function that has this characteristic: in order to compute the answer at i,j I need a result from higher order array at the same i,j. This is what I tried to demonstrate in my example above. Thanks, Scott ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.