Please don't cross-post per R-help posting guide.
The "data" function is not itself data. Provide your data to the function using
the name you assign to it according to the getVarianceStabilizedData function
documentation.
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Suparna Mitra <suparna.mitra...@gmail.com> wrote:
> Hi All,
>I am having a problem while running getVarianceStabilizedData in DDSeq2
>package.
>
>data.vsd<-getVarianceStabilizedData(data)
>Error in (function (classes, fdef, mtable) :
>unable to find an inherited method for function �dispersionFunction�
>for
>signature �"CountDataSet"�
>
>Though the function looks okay
>> dispersionFunction
>standardGeneric for "dispersionFunction" defined from package "DESeq2"
>
>function (object)
>standardGeneric("dispersionFunction")
><environment: 0x7fe7a9c5d140>
>Methods may be defined for arguments: object
>Use showMethods("dispersionFunction") for currently available ones.
>
>Can anybody please help?
>Thanks,
>Mitra.
>
> [[alternative HTML version deleted]]
>
>
>
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>
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>PLEASE do read the posting guide
>http://www.R-project.org/posting-guide.html
>and provide commented, minimal, self-contained, reproducible code.
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