Hi,
Iam trying to run the DanteR package, but keep getting some problems.
I installed the Gtk 2.24 version on my mac and was able than to install the
RGtk2 package and load it.
After installing the DantR package I tried to load it but I keep getting
strange error massages.
> library(DanteR); dante()
Loading required package: RGtk2Extras
Loading required package: RGtk2
Loading required package: gWidgets
Loading required package: gWidgetsRGtk2
Loading required package: RODBC
Loading required package: e1071
Loading required package: class
Loading required package: plotrix
Loading required package: reshape
Loading required package: plyr
...
Loading required package: diagram
Loading required package: shape
Warning messages:
1: package âgWidgetsRGtk2â was built under R version 3.0.2
2: package âRODBCâ was built under R version 3.0.2
3: package âplotrixâ was built under R version 3.0.2
4: package ânlmeâ was built under R version 3.0.2
5: package âscatterplot3dâ was built under R version 3.0.2
*Options file does not exist*
DanteR, v 0.2
> R(19989,0x7fff7b69f960) malloc: *** error for object 0x4024000000000000:
pointer being freed was not allocated
*** set a breakpoint in malloc_error_break to debug
Abort trap: 6
It seems that R is looking for a specific options files. In the Dante.R
script there is also a function which looks for such a file and than gives
the exact error massage if it is not there.
But I am not even sure if R crashes because the file is not there, or if
there is another reason for that.
I would appreciate any help.
Thanks
Assa
> search()
[1] ".GlobalEnv" "package:DanteR" "package:diagram"
[4] "package:shape" "package:pls" "package:MASS"
[7] "package:ellipse" "package:colorspace" "package:scatterplot3d"
[10] "package:RSQLite" "package:DBI" "package:outliers"
[13] "package:car" "package:gplots" "package:rgl"
[16] "package:nlme" "package:reshape" "package:plyr"
[19] "package:plotrix" "package:e1071" "package:class"
[22] "package:RODBC" "package:gWidgetsRGtk2" "package:gWidgets"
[25] "package:RGtk2Extras" "package:RGtk2" "package:stats"
[28] "package:graphics" "package:grDevices" "package:utils"
[31] "package:datasets" "package:methods" "Autoloads"
[34] "package:base"
> sessionInfo()
R version 3.0.1 (2013-05-16)
Platform: x86_64-apple-darwin10.8.0 (64-bit)
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] DanteR_0.2 diagram_1.6.1 shape_1.4.0
[4] pls_2.4-3 MASS_7.3-29 ellipse_0.3-8
[7] colorspace_1.2-4 scatterplot3d_0.3-34 RSQLite_0.11.4
[10] DBI_0.2-7 outliers_0.14 car_2.0-19
[13] gplots_2.12.1 rgl_0.93.963 nlme_3.1-113
[16] reshape_0.8.4 plyr_1.8 plotrix_3.5-2
[19] e1071_1.6-1 class_7.3-9 RODBC_1.3-10
[22] gWidgetsRGtk2_0.0-82 gWidgets_0.0-52 RGtk2Extras_0.6.1
[25] RGtk2_2.20.25
loaded via a namespace (and not attached):
[1] bitops_1.0-6 caTools_1.16 dichromat_2.0-0
digest_0.6.3
[5] gdata_2.13.2 ggplot2_0.9.3.1 grid_3.0.1
gtable_0.1.2
[9] gtools_3.1.0 KernSmooth_2.23-10 labeling_0.2
lattice_0.20-23
[13] munsell_0.4.2 nnet_7.3-7 proto_0.3-10
RColorBrewer_1.0-5
[17] reshape2_1.2.2 scales_0.2.3 stringr_0.6.2
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