On 13-06-30 7:54 PM, Søren Højsgaard wrote:
gRbase use graph, RBGL and Rgraphviz from bioconductor. My understanding is
that if I put vignettes into /vignettes then R CMD build will build the
vignettes and put them into /inst/doc and this works:
gRbase/inst/
gRbase/inst/CITATION
gRbase/inst/doc/
gRbase/inst/doc/gRbase-arrayops1.R
gRbase/inst/doc/gRbase-arrayops1.Rnw
gRbase/inst/doc/gRbase-arrayops1.pdf
gRbase/inst/doc/gRbase-arrayops2.R
gRbase/inst/doc/gRbase-arrayops2.Rnw
gRbase/inst/doc/gRbase-arrayops2.pdf
gRbase/inst/doc/gRbase-graphs.R
gRbase/inst/doc/gRbase-graphs.Rnw
gRbase/inst/doc/gRbase-graphs.pdf
After installing I then get
vignette(package="gRbase")
no vignettes found
sorenh@sorenh:~/docs/stat/Rdevel/gmwR-DEVEL/gRbaseDEVEL$ R --version
R version 3.0.1 (2013-05-16) -- "Good Sport"
Copyright (C) 2013 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
However, Martin Morgan reports that it works for him. I don't know what to make
of this.
Do you have all of those packages installed at the time you install
gRbase? If so, it may be a bug. As I said, installation code is being
worked on.
Duncan Murdoch
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