$ INFECTION: Factor w/ 2 levels "Infected ","Uninfected ": 2 1 2 1 2 2 1 2

it is a factor variable, so it takes numeric values, for "Infected "  it is
assigned value 1.

subset(REC2,  INFECTION==1)


2013/5/3 Jorge I Velez <jorgeivanve...@gmail.com>

> Hi Kasia,
>
> You need
>
> subset(REC2,  INFECTION=="Infected ")
>
> (note the space after "Infected").
>
> HTH,
> Jorge.-
>
>
> On Fri, May 3, 2013 at 7:48 PM, Katarzyna Kulma
> <katarzyna.ku...@gmail.com>wrote:
>
> > Hi everyone,
> >
> > I know there have been several requests regarding subsetting before, but
> > none of them really helps with my problem:
> >
> > I'm trying to subset only infected individuals from the REC2 data.frame:
> >
> > > str(REC2)
> > 'data.frame':    362 obs. of  7 variables:
> >  $ RINGNO   : Factor w/ 370 levels "BL17546","BL17577",..: 78 81 67 41 58
> > 66 17
> >  $ year     : Factor w/ 8 levels "Y2002","Y2003",..: 1 2 1 2 1 1 2 1 1 3
> > ...
> >  $ ccFLEDGE : int  6 6 6 5 6 7 6 7 6 5 ...
> >  $ rec2012  : int  2 1 2 2 1 2 1 1 1 0 ...
> >  $ binage   : Factor w/ 2 levels "ad","juv": 1 2 1 1 1 1 1 1 1 1 ...
> >  $ INFECTION: Factor w/ 2 levels "Infected ","Uninfected ": 2 1 2 1 2 2
> 1 2
> > 2 1 ...
> >  $ all.rsLD : num  -4.62 -6.19 -3.62 -4.19 -2.62 ...
> >
> > using either
> >
> > RECinf<-REC2[which (REC2$INFECTION=="Infected"),]
> >
> > or
> >
> > RECinf<-subset(REC2,  INFECTION=="Infected")
> >
> > in both cases I get empty data frame (0 observations):
> >
> > > str(RECinf)
> > 'data.frame':    0 obs. of  7 variables:
> >  $ RINGNO   : Factor w/ 370 levels "BL17546","BL17577",..:
> >  $ year     : Factor w/ 8 levels "Y2002","Y2003",..:
> >  $ ccFLEDGE : int
> >  $ rec2012  : int
> >  $ binage   : Factor w/ 2 levels "ad","juv":
> >  $ INFECTION: Factor w/ 2 levels "Infected ","Uninfected ":
> >  $ all.rsLD : num
> >
> > When subsetting, R doesn't return any warning or error message. Besides,
> I
> > used same codes many times before and they worked perfectly well. Any
> ideas
> > why this case is different?
> >
> > Thanks for your help,
> > Kasia
> >
> >         [[alternative HTML version deleted]]
> >
> > ______________________________________________
> > R-help@r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-help
> > PLEASE do read the posting guide
> > http://www.R-project.org/posting-guide.html
> > and provide commented, minimal, self-contained, reproducible code.
> >
>
>         [[alternative HTML version deleted]]
>
> ______________________________________________
> R-help@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>



-- 
Luis Iván Ortiz Valencia
Doutorando Saúde Pública - Epidemiologia, IESC, UFRJ
Estatístico Msc.
Spatial Analyst Msc.

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