On 04/03/2013 10:15 AM, Maria Arnedo Munoz wrote:
Hello everybody!
I am not sure if this is the way for asking because I am new in this kind of
"help-website" so, please if I am wrong tell me.
Hi Maria -- makecdfenv is a Bioconductor package, so ask on their mailing list
http://bioconductor.org/help/mailing-list/
Best,
Martin
I am trying to make a cdf package for the Human Exon Array chip from Affymetrix
(HuEx-1_0-st-v2). I have downloaded the file HuEx-10-st-v2.cdf from the
Affymetrix website and write the following commands in the R program:
library(makecdfenv)
pkgpath<-tempdir()
make.cdf.package("HuEx-1_0-st-v2.text.cdf",cdf.path="/Working/",compress=F,
species = "Homo_sapiens", package.path = pkgpath)
It costs me a lot of time and most of the RAM memory of my computer and at the
end the following message appears:
Reading CDF file.
Error in .Call("reaD file", as.character(file), as.integer(3),
as.integer(compress), :promise already under evaluation: recursive default
argument reference or earlier problems?
I have no idea if I am doing anything wrong or if there is a better method for
making the package, so any help will be really welcome.
Thank you,
Maria
--
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109
Location: Arnold Building M1 B861
Phone: (206) 667-2793
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
