Hello,
If you want to calculate the mean weight by Specie and Food.item, you
can use ?aggregate.
In what follows, I've named your EXAMPLE ex and your SOLUTION sol. Note
that the result is different from sol.
(No exemplo não há Peixe, é Fish, e os números são outros.)
aggregate(Weight ~ Specie + Food.item, data = ex, FUN = mean)
Hope this helps,
Rui Barradas
Em 16-01-2013 15:41, Raoni Rodrigues escreveu:
> Hello All,
>
> I have a data frame (dput information below) with food item weight for fish
> species.
>
> I need to calculate the Mean proportion by weight of each food item for
> each specie, as show in solution data frame (dput information below).
>
> I use the ddply function (plyr package) in two steps. First calculate the
> proportion of weight for each individual:
>
> step1 = ddply (example, .(ID), transform, Wi = round (Weight/sum (Weight),
> 2))
>
> Then, I use lenght (unique (ID)) to calculate the mean of each food item
> for each specie:
>
> step2 = ddply (step1, .(Specie, Food.item), summarise, MWi = sum
> (Wi)/length (unique(ID)))
>
> I do not understand why this didn't work. Someone can help me?
>
> Thanks in advanced!
>
>
> *EXAMPLE*
> structure(list(ID = c(779L, 782L, 1717L, 1717L, 1717L, 1803L,
> 2650L, 2650L, 2700L, 2700L, 3611L, 3613L, 3647L, 3654L, 3654L,
> 3683L, 3683L, 3683L, 3685L, 3997L), Site = c("Três Marias", "Três Marias",
> "Nova Ponte", "Nova Ponte", "Nova Ponte", "Três Marias", "São Simão",
> "São Simão", "São Simão", "São Simão", "São Simão", "São Simão",
> "São Simão", "São Simão", "São Simão", "São Simão", "São Simão",
> "São Simão", "São Simão", "São Simão"), Specie = c("Acestrorhynchus
> lacustris",
> "Acestrorhynchus lacustris", "Acestrorhynchus lacustris", "Acestrorhynchus
> lacustris",
> "Acestrorhynchus lacustris", "Acestrorhynchus lacustris", "Schizodon
> intermedius",
> "Schizodon intermedius", "Schizodon intermedius", "Schizodon intermedius",
> "Schizodon intermedius", "Schizodon intermedius", "Schizodon intermedius",
> "Schizodon intermedius", "Schizodon intermedius", "Schizodon intermedius",
> "Schizodon intermedius", "Schizodon intermedius", "Schizodon intermedius",
> "Schizodon intermedius"), Weight = c(0.06, 0.01, 0.01, 0.33, 0.01,
> 3.5, 0.01, 0.04, 0.01, 0.01, 0.38, 0.29, 0.04, 0.03, 0.11, 0.04,
> 0.04, 0.03, 0.01, 0.01), Food.item = c("Fish", "Vegetal", "Alga",
> "MNI", "Sediment", "Fish", "Alga", "MNI", "Alga", "MNI", "Vegetal",
> "Vegetal", "Vegetal", "Alga", "Vegetal", "Alga", "MNI", "Sediment",
> "Sediment", "Vegetal")), .Names = c("ID", "Site", "Specie",
> "Weight", "Food.item"), row.names = c(1869113L, 2290407L, 56668L,
> 1485394L, 2126489L, 368143L, 57601L, 1486327L, 57651L, 1486377L,
> 2348187L, 2348189L, 2293272L, 58605L, 2293279L, 40317L, 1487360L,
> 2128455L, 2128457L, 2293622L), class = "data.frame")
>
>
> *SOLUTION*
> structure(list(Specie = c("Acestrorhynchus lacustris", "Acestrorhynchus
> lacustris",
> "Acestrorhynchus lacustris", "Acestrorhynchus lacustris", "Acestrorhynchus
> lacustris",
> "Schizodon intermedius", "Schizodon intermedius", "Schizodon intermedius",
> "Schizodon intermedius"), Food.item = c("Peixe", "Vegetal", "Alga",
> "MNI", "Sedimento", "Alga", "MNI", "Vegetal", "Sedimento"), MWi = c("0.5",
> "0.25", "0.0075", "0.235", "0.0075", "0.141111111", "0.184444444",
> "0.532222222", "0.141111111")), .Names = c("Specie", "Food.item",
> "MWi"), class = "data.frame", row.names = c(NA, -9L))
> *
> *
> sessionInfo()
> R version 2.15.2 (2012-10-26)
> Platform: i386-w64-mingw32/i386 (32-bit)
> Windows XP
> *
> *
>
>
> ______________________________________________
> R-help@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
[[alternative HTML version deleted]]
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
