I believe you are looking for a detailed construction of Fisher's Exact Test. I have an example with code in my book and R package.
The book discussion is Section 15.2 of Heiberger, Richard M., and Burt Holland (2004). Statistical Analysis and Data Display: An Intermediate Course with Examples in S-Plus, R, and SAS. Springer--Verlag, New York. http://springer.com/0-387-40270-5 Table 15.2 shows the full set of tables for the example. The package is HH install.packages("HH") The code to construct Table 15.2 is in file library/HH/scripts/Ch15-twtb.r Search for the line: ## study the construction of the Fisher Exact test and read through to the end of the glasses example. Rich On Sat, Dec 1, 2012 at 7:25 AM, Christofer Bogaso < bogaso.christo...@gmail.com> wrote: > Hello all, > > Let say I have 2-way contingency table: > > Tab <- matrix(c(8, 10, 12, 6), nr = 2) > > and the Chi-squared test could not reject the independence: > > > chisq.test(Tab) > > Pearson's Chi-squared test with Yates' continuity correction > > data: Tab > X-squared = 1.0125, df = 1, p-value = 0.3143 > > > However I want to get all possible contingency tables under this > independence scenario (one of them would obviously be the given table as, > we could not reject the independence), and for each such table I want to > calculate the Ch-sq statistic. > > Can somebody help me how to generate all such tables? > > Thanks and regards, > > ______________________________**________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/**listinfo/r-help<https://stat.ethz.ch/mailman/listinfo/r-help> > PLEASE do read the posting guide http://www.R-project.org/** > posting-guide.html <http://www.R-project.org/posting-guide.html> > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
