Hello everyone,
Im working with graphNEL object and want to extract all the nodes which
have adjacent nodes with at least 20 nodes in between them.
acc(graph, graphnodes) obviously provides a list for the accessable
nodes of every node from a node and a number of the edges between them.
Like this:
$`hsa:8379`
hsa:100131844 hsa:10393 hsa:246184 hsa:29882 hsa:29945
1 1 1 1 1
hsa:51433 hsa:51434 hsa:51529 hsa:64682 hsa:8697
1 1 1 1 1
$`hsa:51343`
hsa:23594 hsa:23595 hsa:5001 hsa:5000 hsa:4999 hsa:4998
8 8 8 8 8 8
and so on. However I want know access the numbers so that I can compare
these
edgenumbers and only retrieve the nodes with an accessable node with at
least
20 edges as mentioned above. How can I achieve this? In addtion whats the
data
type of the result of acc(). Is it a list in a list?
Thank you
--
View this message in context:
http://r.789695.n4.nabble.com/GraphNEL-object-retrieve-edgenumber-from-acc-or-is-it-list-of-lists-tp4648174.html
Sent from the R help mailing list archive at Nabble.com.
______________________________________________
[email protected] mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.